Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01444 ATGCCTTTGTTGGAGGACTTCAACAACATATTTGGTGGCACAAAGCTCAAAAATCTGCTTTGGACTTCATGGCAATCACTAGAATCACCATGCTTGTTAGAGCATGTAATTCTACCTGTGGAGCTTGGGTTCTTTGTGATCTTGTTAGTCCAACTCCTAAGAAAATATGTGAACCTTTTCAGCAAGCAAACCAAGGTCCCAGATAGTGCCACAGAGATGATGCACCCAACTGCAATCAAATTTGGTTTTGCTTACAAACTCTGCTTAGTATGCACCACATTGTTGTTGCTTGTCCATGCATCACTGCTACTACTGATGCTCAATCATGAGACTCAATGCACCTCAACACTCAAGGCCCTCACATCAGAGATAGTTCAAGTGTTGTCATGGGTGATAAGTCTTCTAGCAACATGCAAGATATCAAAATCAAATGCATATTACCCTTGGCTTCTAAGGACTTGGTGGCTTTGCAATTTCATTTTGTGTGTTATCACCACAGCCATTCATGTCCATTTCAGTGTCACCAACAAGGGTCATATCAGTACAAGAGAATGTGCAGATTTCATTGGTTTGATTGCTTCAACAAGCCTTTTGGTTATTTCCACAAGAGGGAAAACAGGCACTGTCTTGCTTGCATCAAATGGTGCATCAGAACCACTTCTTGGAGACAAAACAGAGAAACATTCACAGACTCAAAGTCAAAAGGAATCTCCATATGGAAAAGCCACTCTTCTCCAACTCATTAACTTCTCATGGCTCAACCCTTTGTTTGCAATAGGGTACAAGAAACCCCTTGAGCAGAATGACATTCCTGATGTTGACATCAAGGACTCAGCTGAGTTTCTAACCTGCTCCTTTGATGAGAGCCTGAGACAAGTCAAAGAGAGAGATGGCACTGCAAATCCTTCTATCTACAAGGCAATCTATCTGTTTGCTAGGAAGAAAGCAGCAATGAATGCACTCTTTGCAGTGGTGAATGCTTCAGCATCCTATGTTGGTCCATACTTGATAACTGACTTTGTGGATTTCCTAGGAGAAAAGGAAATGCGTGGCTTGAAGAGTGGATACCTTCTGTCACTGGCTTTTCTGTGTGCCAAAATGGTTGAGACCATAGCTCAGAGGCAATGGATTTTTGGTGCCAGACAATTAGGCCTTCGCCTTAGAGCGGCGCTGATATCGCATATCTATCAGAAGGGCCTTCATCTGTCGAGTAGATCACGACAAAGTCACACTGGTGGTGAGATCATGAACTTCATGAGTGTAGATGTGCAGAGAATCACAGATTTTGTTTGGTATGTGAATGTAATATGGATGCTGCCAATACAAATTTCCTTAGCAGTGTTCATTTTGCATACAAATCTAGGACTGGGTTCATTGGCTGCATTAGTGGCTACATTGGCTGTAATGGCTTTGAACATACCCTTAACAAAGATACAGAAAAGATACCAAGCAAAGATCATGGATGCTAAGGACAACAGGATGAAAGCCACTTCAGAAATCCTAAGAAACATGAGGACTTTGAAACTTCAAGCATGGGACAGTCAATTTTCTGAAAGGATAGAAGCACTTAGGAAAGTAGAGTACAATTGGTTGATGAAGTCTTTGAGGCAAGCAGCATTCACTGCTTTTATCTTTTGGGGGTCACCTACATTCATTTCTGTGATAACTTTTTGGGCATGCATGTTCATGGGGATTGCACTTACAGCAGGAAGAGTCTTGTCTGCATTCGCCACATTTCGAATGCTGCAGGATCCTATCTTTAGTCTACCTGATTTGCTCAACGTCATTGCTCAAGGGAAGGTTTCAGTTGATAGGATTGCTTCCTTCCTCCGCGAGGAAGAAATTCAGCATGATGTCATTGAATATGTTGCAAAGGACAGAACAGAATTTGACATAGTTATTGAGAGAGGGAGATTCAGCTGGGATCCTGAGTCTACAACTCCAACAATTGATCAAATAGAGTTGAAAGTTAAGAGGGGAATGAAGGTGGCAATTTGTGGATCTGTAGGTTCAGGAAAGTCTAGTCTGCTATCAAGCATTTTGGGAGAGATATATAAACAGTCAGGGACAGTCAAGATTAGTGGAACAAAAGCTTATGTTCCACAATCAGCATGGATACTGACTGGAAATATAAGGGACAACATTACCTTTGGAAAAGATTTGAATGAAGATAGGTATGAGAAAACTGTTGAGGCATGTGCATTGAAAAAGGACTTCGAGCTATTCTCAGGTGGTGACATGACAGAGATTGGAGAGAGAGGGATTAACATGAGTGGGGGACAGAAGCAAAGGATACAGATAGCTAGAGCAGTTTACCAGGATGCTGATATATACCTTTTTGATGACCCTTTCAGTGCTGTGGATGCTCATACTGGCACTCACCTCTTTAAGGAGTGCCTTATGGGGATTCTCAAAGAGAAAACTATAATTTTTGTTACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTGATGCAAAATGGAAGGATAGCACAAGCTGGAAAATTTGAAGATCTTTTAAAGCAAAATATAGGATTTGAAGTTTTAGTTGGTGCCCACAGCAAAGCTCTAGAGACAATCTTGGAGGCTGAAAATTCAAGTAGAACAAATTTAAATTCAATATCTGAAGAAGGGGAATCCAACTGCAACTCCAAGACAAATCTTCAACATGTCCACATACAGCATGACACAGTGCAAGACAATCCTTCAGAGGGCAAAGAAAATGATGGAAAGTTGGTGCAAGATGAAGAAAGAGAAACAGGAAGCATAGCAAAAGAAGTTTACTGGGCTTATTTGACCACTGTCAAAGGAGGAATCCTGATTCCTCTCATACTCTTGGCCCAGTCTTCATTCCAAATACTTCAGATTGCCAGTAACTATTGGATGGCTTGGGTTTGTCCCACAAGTAGTGATGCTAAGCCTTTATATGACATGAATTTTATACTACTTATTTATATGACACTCTCAGTTGCTGGTTCATTGTGTGTTTTGCTACGTGCCATGATGGTGTTAAATGCTGGACTTTGGACAGCACAAGCACTTTTCACAAAGATGTTGCATAATGTGCTCAGAGCCCCCATGGCATTTTTTGATTCTACACCAACTGGAAGAATCTTGAACAGGGCCTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCAAACAAAATAGGATGGTGTGCTTTCTCAATAATACAGATTCTAGGCACTATTGCAGTGATGTGTCAGGTGGCATGGCAAGTATTTGTCATCTTCATTCCAGTAACTGCAGTCTGCATATGGTATCAAAGATATTATACACCAACAGCAAGAGAACTGGCTCGCTTGGCACAGATACAAATTACTCCAATTCTCCACCACTTTTCAGAATCTTTAGCAGGAGCAGCATCGATACGAGCTTTCGATCAAGAGGGTCGTTTCATATACACAAATCTTCTTCTTGTGGATGGCTTCTCAAGGCCATGGTTTCACAATGTGTCAGCAATGGAATGGCTTTCTTTCAGATTGAATTTACTTTCAAATTTTGTTTTTGCCTTCTCACTGGTTATGCTGGTGAGCCTCCCTGAAGGAATAATCAACCCAAGTATTGCCGGTTTGGCAGTAACATACGGAATCAATCTAAATGTGTTGCAAGCTTCAGTTATATGGAACATATGCAATGCAGAAAACAAGATGATATCAGTTGAAAGAATTCTTCAGTATACAAATATAGCAAGTGAAGCACCTCAAGTGATTGAAGACTGCAGACCACCAAGCAACTGGCCACAAACGGGAACGATATGTTTCAAAAATTTGCAGATACGTTATGCTGAACATCTACCATCTGTGTTGAAAAACATCACTTGCACATTTCCTGGAAGGAAGAAAGTTGGAGTTGTAGGGCGCACAGGGAGTGGAAAATCAACTCTCATACAAGCCATTTTCAGGATGGTTGAACCAAGAGAAGGAAGCATTATAATTGACAATGTGGACATATGCAAGATAGGTCTCCATGACTTGAGGTCAAGGCTTAGCATTATCCCACAAGACCCTGCATTGTTTGAAGGCACTGTTAGAGGAAACCTGGACCCTCTACAGCAATACTCTGACACTGAAGTGTGGGAGGCTCTAGATAAATGTCAGCTAGGTCACCTGGTGAGGGCCAAGGAAGAGAAGTTGGATTCTCCAGTGGTTGAAAATGGTGATAACTGGAGTGTGGGCCAAAGGCAATTATTTTGCCTTGGAAGAGCCCTGCTGAAAAGAAGCAGCATATTAGTACTAGATGAAGCAACAGCCTCAGTGGATTCCGCAACTGATGGGGTGATACAGAACATCATAAGTCATGAGTTCAAAGATAGGACTGTTGTCACAATAGCTCATAGAATCCACACAGTTATTGATAGTGATTTGGTTTTAGTGCTCAGTGATGGGAGAATTGCCGAGTATGATGAACCATCAAAGTTACTTGAGAGAGAAGAATCCTTCTTCTTCAAACTTATAAAGGAGTATTCTGGAAGATCACATAACTTCAACACCTTGGCAACTCAACATGTCCAAAGCAGGGAACAATCATGA 4563 0.4146 MPLLEDFNNIFGGTKLKNLLWTSWQSLESPCLLEHVILPVELGFFVILLVQLLRKYVNLFSKQTKVPDSATEMMHPTAIKFGFAYKLCLVCTTLLLLVHASLLLLMLNHETQCTSTLKALTSEIVQVLSWVISLLATCKISKSNAYYPWLLRTWWLCNFILCVITTAIHVHFSVTNKGHISTRECADFIGLIASTSLLVISTRGKTGTVLLASNGASEPLLGDKTEKHSQTQSQKESPYGKATLLQLINFSWLNPLFAIGYKKPLEQNDIPDVDIKDSAEFLTCSFDESLRQVKERDGTANPSIYKAIYLFARKKAAMNALFAVVNASASYVGPYLITDFVDFLGEKEMRGLKSGYLLSLAFLCAKMVETIAQRQWIFGARQLGLRLRAALISHIYQKGLHLSSRSRQSHTGGEIMNFMSVDVQRITDFVWYVNVIWMLPIQISLAVFILHTNLGLGSLAALVATLAVMALNIPLTKIQKRYQAKIMDAKDNRMKATSEILRNMRTLKLQAWDSQFSERIEALRKVEYNWLMKSLRQAAFTAFIFWGSPTFISVITFWACMFMGIALTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLREEEIQHDVIEYVAKDRTEFDIVIERGRFSWDPESTTPTIDQIELKVKRGMKVAICGSVGSGKSSLLSSILGEIYKQSGTVKISGTKAYVPQSAWILTGNIRDNITFGKDLNEDRYEKTVEACALKKDFELFSGGDMTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFKECLMGILKEKTIIFVTHQVEFLPAADLILVMQNGRIAQAGKFEDLLKQNIGFEVLVGAHSKALETILEAENSSRTNLNSISEEGESNCNSKTNLQHVHIQHDTVQDNPSEGKENDGKLVQDEERETGSIAKEVYWAYLTTVKGGILIPLILLAQSSFQILQIASNYWMAWVCPTSSDAKPLYDMNFILLIYMTLSVAGSLCVLLRAMMVLNAGLWTAQALFTKMLHNVLRAPMAFFDSTPTGRILNRASTDQSVLDLEMANKIGWCAFSIIQILGTIAVMCQVAWQVFVIFIPVTAVCIWYQRYYTPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEGRFIYTNLLLVDGFSRPWFHNVSAMEWLSFRLNLLSNFVFAFSLVMLVSLPEGIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNIASEAPQVIEDCRPPSNWPQTGTICFKNLQIRYAEHLPSVLKNITCTFPGRKKVGVVGRTGSGKSTLIQAIFRMVEPREGSIIIDNVDICKIGLHDLRSRLSIIPQDPALFEGTVRGNLDPLQQYSDTEVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSVGQRQLFCLGRALLKRSSILVLDEATASVDSATDGVIQNIISHEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREESFFFKLIKEYSGRSHNFNTLATQHVQSREQS 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01444 1520 MobiDBLite consensus disorder prediction 899 919 - -
Cca01g01444 1520 Gene3D - 627 858 IPR027417 -
Cca01g01444 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 627 848 IPR027417 -
Cca01g01444 1520 SUPERFAMILY ABC transporter transmembrane region 313 614 IPR036640 GO:0005524|GO:0016021
Cca01g01444 1520 MobiDBLite consensus disorder prediction 900 919 - -
Cca01g01444 1520 SUPERFAMILY ABC transporter transmembrane region 932 1245 IPR036640 GO:0005524|GO:0016021
Cca01g01444 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 628 855 IPR003439 GO:0005524
Cca01g01444 1520 PANTHER - 88 1508 - -
Cca01g01444 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1265 1497 IPR003439 GO:0005524
Cca01g01444 1520 Pfam ABC transporter 1280 1428 IPR003439 GO:0005524
Cca01g01444 1520 Pfam ABC transporter 651 784 IPR003439 GO:0005524
Cca01g01444 1520 ProSitePatterns ABC transporters family signature. 757 771 IPR017871 GO:0005524
Cca01g01444 1520 CDD ABC_6TM_ABCC_D1 320 606 IPR044746 GO:0140359
Cca01g01444 1520 Gene3D ABC transporter type 1, transmembrane domain 908 1244 IPR036640 GO:0005524|GO:0016021
Cca01g01444 1520 Coils Coil 479 499 - -
Cca01g01444 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1255 1491 IPR027417 -
Cca01g01444 1520 CDD ABCC_MRP_domain2 1261 1481 - -
Cca01g01444 1520 SMART AAA_5 659 832 IPR003593 -
Cca01g01444 1520 SMART AAA_5 1289 1481 IPR003593 -
Cca01g01444 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 946 1226 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca01g01444 1520 CDD ABCC_MRP_domain1 632 832 - -
Cca01g01444 1520 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 88 1508 - -
Cca01g01444 1520 CDD ABC_6TM_ABCC_D2 944 1238 IPR044726 GO:0140359
Cca01g01444 1520 Gene3D ABC transporter type 1, transmembrane domain 292 618 IPR036640 GO:0005524|GO:0016021
Cca01g01444 1520 Pfam ABC transporter transmembrane region 955 1190 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca01g01444 1520 Pfam ABC transporter transmembrane region 319 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca01g01444 1520 Gene3D - 1246 1499 IPR027417 -
Cca01g01444 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 320 598 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01444 Cca-Chr1 29827067 29842033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01444 639 878 Calmodulin-binding Proteins AT2G36910 27.692 7.93e-21 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01444 - - gmx:100809749 2714.87