Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01433 ATGGATCCCCAGGCCTTCATTAGGCTGTCAATAGGTTCTCTGGGGTTGCGATGCACCGGAATTGAGCTGAGCACTGAAAAATCTGGAATTCAAACACTCTCTTTACCTTGTGTTTGTGAGATACGGCTTCGAGGTTTTCCTGTTCAAACGTCATCAGTGCCCGTGATATCCTCCACAGATGTTATACCTGATACTCAGAACATTGCTTCTAGCTTTTACCTTGAGGAATCTGACTTAAAAGCATTGTTAGCTCCTGGTTGTTTCTACAACACTCAAGCTTGTTTGGAGATTGCTGTGTTTTCAGGGAGGAAGGGATCCCATTGTGGAGTTGGCATTAAAAGGCAGCAAATTGGTATTTTTAAGATGCAGGTTGGCCCCGAATGGGGTGAAGGAAAGCCGTTGATTCTCTTTAACGGATGGATAGGCATTGGCAAGAACAAACAGGATCATGGAAAGCCGGGTGCGCAGCTACATTTAAAAGTGAAATTAGATTCTGACCCTAGATATGTGTTCCAGTTTGAAGATATAACAACATTGAGTCCTCAGATAGTTCAACTGCAAGGATCCATCAAGCAGCCAATCTTCAGCTGCAAGTTTAGTAAGGACAGGGTTTCCCAGATTGACCCATTGAGCGCTTGGTCAGGTTCTGCTGACATTTCTGATTTAGAGACAGAGAGGAGAGAAAGAAAGGGGTGGAAGGTGACAATACATGATCTCTCTGGCTCAGCTGTAGCTGCAGCCTTCATAACAACTCCCTTTGTTCCATCTTCAGGTTGTGATTGGGTTGCCAGATCCAACCCAGGATCTTGGTTGATTGTTCGTCCCGACATAGGTAGATCTGAGAGCTGGCAGCCATGGGGAAAGCTCGAAGCATGGCGTGAGCGTGGCATTAGAGACACTGTTTGCTGCAGATTCCATCTTCTATCTGAAGCCCAAGAGGGGGGTGAACTTCTTATGTCTGAAATACACATAAGTGCTGAAAAAGGTGGAGAGTTTTTCATAGACACTGAGAAACACGTGCGAACTGCAACCAGTGCAGCAAGTCCAATACCTAGTCCACAAAGCAGTGGAGACTTTGGTGCGCTGAGTCCAATGGTTGGAGGTTTCGTCATGAGTTGTAGGGTTCAAGGTGAAGGGAAGCGGAGTAAACCGTTAGTACAACTGGCAATGCGACATGTGACGTGTGTGGAGGATGCTGCCATCTTCATGGCGCTTGCGGCAGCTGTTGACCTCAGTATCGAGGCCTGTAAACCTTTCCGGAGGAAGGTGAGGAGAGGTTTCTGGCATTCTATGTGA 1296 0.4676 MDPQAFIRLSIGSLGLRCTGIELSTEKSGIQTLSLPCVCEIRLRGFPVQTSSVPVISSTDVIPDTQNIASSFYLEESDLKALLAPGCFYNTQACLEIAVFSGRKGSHCGVGIKRQQIGIFKMQVGPEWGEGKPLILFNGWIGIGKNKQDHGKPGAQLHLKVKLDSDPRYVFQFEDITTLSPQIVQLQGSIKQPIFSCKFSKDRVSQIDPLSAWSGSADISDLETERRERKGWKVTIHDLSGSAVAAAFITTPFVPSSGCDWVARSNPGSWLIVRPDIGRSESWQPWGKLEAWRERGIRDTVCCRFHLLSEAQEGGELLMSEIHISAEKGGEFFIDTEKHVRTATSAASPIPSPQSSGDFGALSPMVGGFVMSCRVQGEGKRSKPLVQLAMRHVTCVEDAAIFMALAAAVDLSIEACKPFRRKVRRGFWHSM 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01433 431 PANTHER OS08G0163500 PROTEIN 1 429 IPR010410 -
Cca01g01433 431 Pfam Protein of unknown function (DUF1005) 1 426 IPR010410 -
Cca01g01433 431 PANTHER - 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01433 Cca-Chr1 29559712 29564671 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01433 - - gmx:100815012 830.861