Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01425 ATGACACACAGCATGGAGCAAGTGAGGAACAAACAAGTGGTTCTAAAGAACTATGTCACCGGTTTCCCCAAAGAATCCGACATGAACATTGTTGAAAGCACTGTGGTTTTGAAGCTTCCAGAAGGTTCCAGTGAGGTCCTCCTAAAAAATCTCTACTTGTCCTGTGATCCATACATGCGACTCCTCATGACCCAGGACCGTACTGTTGGAACTGGCACCTACACCCTTGCATCTCCATTAACAGGATATGGCGTGTCTAAAGTGCTGGAATCTGGACACCCAGATTATAAGACAGGCGATTTTGTGTGGGGGATTACGAAATGGGAAGAATATAGCTTCGTCCCCTCATCTCAAATACGCTTCAAAATTGAGCATACTGATATCCCACTTTCGTACTATACTGGATTTCTTGGTATGCCAGGAATGACTGCTTATGCAGGTTTCTTTGAAGTAGGCTCTCCCAAGAAAGGAGAAAATGTTTTTGTTTCAGCTGCCTCTGGGGCTGTTGGTCAACTTGTTGGCCAATTTGCTAAGATGACTGGTTGTTATGTTGTTGGAAGTGCTGGAAGTAAAGAGAAGGTGGATCTGTTGAAGAATAAATTAGGATTTGATGAAGCTTTTAACTATAAGGAAGAGCCAGATCTCAATGCAGCTTTGAAAAGGTACTTTCCAGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGCAAGACACTTGATGCAGTACTCCCAAATATGAGGGTCCATGGTCGCATACCTGTCTGTGGAATGATATCACAGTATAATCTTACACAATTGGATGGTGTAACAAATTTGGCAAATCTCATATATAAGCGGATTAAAATGGAAGGTTTCATTGTAAATGATTTCTATCATCTGTATCCCAAATTCTTGGAGCTCCTCCTGCCTCATATCAGAGAAGGGAAGGTTGTGTATGCAGAAGACATTGCTGAGGGCCTTGAGAATGGCCCAGCAGCTTTGGTTGGTCTCTATACTGGTCAAAATGTTGGCAAACAAGTGGTCGTTGTTGCTCGTGAGTAA 1041 0.4275 MTHSMEQVRNKQVVLKNYVTGFPKESDMNIVESTVVLKLPEGSSEVLLKNLYLSCDPYMRLLMTQDRTVGTGTYTLASPLTGYGVSKVLESGHPDYKTGDFVWGITKWEEYSFVPSSQIRFKIEHTDIPLSYYTGFLGMPGMTAYAGFFEVGSPKKGENVFVSAASGAVGQLVGQFAKMTGCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEEPDLNAALKRYFPEGIDIYFENVGGKTLDAVLPNMRVHGRIPVCGMISQYNLTQLDGVTNLANLIYKRIKMEGFIVNDFYHLYPKFLELLLPHIREGKVVYAEDIAEGLENGPAALVGLYTGQNVGKQVVVVARE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01425 346 CDD double_bond_reductase_like 8 343 - -
Cca01g01425 346 SMART PKS_ER_names_mod 46 341 IPR020843 GO:0016491
Cca01g01425 346 Pfam N-terminal domain of oxidoreductase 11 118 IPR041694 -
Cca01g01425 346 Pfam Zinc-binding dehydrogenase 168 301 IPR013149 -
Cca01g01425 346 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 5 346 - -
Cca01g01425 346 Gene3D - 136 312 - -
Cca01g01425 346 PANTHER PROSTAGLANDIN REDUCTASE 5 346 IPR045010 GO:0016628
Cca01g01425 346 SUPERFAMILY GroES-like 8 174 IPR011032 -
Cca01g01425 346 Gene3D - 12 341 - -
Cca01g01425 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 135 306 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01425 Cca-Chr1 29251139 29254857 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01425 K19825 - gmx:100812880 620.928