Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01423 ATGACGCAAGTGAGGAACAAACAAGTGATTCTAAGGGACTATGTGAGTGGTTTTCCTAAGGAATCAGACATGAATGTCGTTGAAGGAACCATAACATTGAAGCTACCAGAAGGTTCCAATGAAGTGCTCCTCAAAAATCTCTACCTATCATGTGATCCTTACATGGTAGCCCTCATGAGAAAGATGGGCCCCGAGGGATTTCAAACCTATACACCTGGCTCTCCATTAACAGGTTTGGTAACTCCAACTGTACTTTTCAAGATTGAGCACACTGATGTCCCACTCTCATATTATACTGGTATTCTTGGTATGCCAGGAATGACTGCTTATGCTGGATTTTTTGAATTAGGCTCTCCGAAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCCTCAGGTGCAGTTGGACAACTTGTTGGTCAATTTGCAAAATTGACTGGTTGTTATGTGGTTGGAAGTGCTGGAAGTAAAGAGAAGGTGGATCTTTTGAAGAATAAGTTAGGATTTGATGAAGCCTTTAACTACAAAGAAGAGTCAGACCTCAATGCAACTTTCAAAAGATACTTTCCAGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGCAAGACACTTGATGCGGTACTCCTGAATATGAAAGTTCATGGACGTATACCCGTTTGTGGAATGATATCACAGTATAATCTTACACAACCTGAAGGTGTAACAAATTTGGCAAATATCATATTTAAGAGGGTTTGTATGCAAGGCTTTACTGTTGGCGATTTCTATCACCTATATCCCAAATTTTTGGATTTTATATTGCCTCATATCAAAGAAGGGAAGATTATGTATGTGGAAGACATAGATGAGGGCCTTGAAAATGGTCCTGGAGCCTTAGTTGGCCTCTATAGTGGTCGTAATTTTGGTAAGCAAGTGCTAGTTGTAGCTCGTGACTGA 936 0.4028 MTQVRNKQVILRDYVSGFPKESDMNVVEGTITLKLPEGSNEVLLKNLYLSCDPYMVALMRKMGPEGFQTYTPGSPLTGLVTPTVLFKIEHTDVPLSYYTGILGMPGMTAYAGFFELGSPKKGENVFVSAASGAVGQLVGQFAKLTGCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEESDLNATFKRYFPEGIDIYFENVGGKTLDAVLLNMKVHGRIPVCGMISQYNLTQPEGVTNLANIIFKRVCMQGFTVGDFYHLYPKFLDFILPHIKEGKIMYVEDIDEGLENGPGALVGLYSGRNFGKQVLVVARD 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01423 311 Pfam Zinc-binding dehydrogenase 133 266 IPR013149 -
Cca01g01423 311 SUPERFAMILY GroES-like 3 138 IPR011032 -
Cca01g01423 311 PANTHER PROSTAGLANDIN REDUCTASE 1 82 IPR045010 GO:0016628
Cca01g01423 311 PANTHER PROSTAGLANDIN REDUCTASE 83 310 IPR045010 GO:0016628
Cca01g01423 311 Pfam N-terminal domain of oxidoreductase 7 84 IPR041694 -
Cca01g01423 311 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 1 82 - -
Cca01g01423 311 Gene3D - 87 305 - -
Cca01g01423 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 270 IPR036291 -
Cca01g01423 311 Gene3D - 101 277 - -
Cca01g01423 311 Gene3D - 1 81 - -
Cca01g01423 311 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 83 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01423 Cca-Chr1 29138980 29141877 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01423 - K19825 gmx:100812337 533.102