Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01412 ATGGCGCAAGTGAGGAACAAGCAAGTGCTTCTAAGGGACCATGTCACTGGTTTTCCTAAAGAATCCGACATGAACATTGTTGAAAGTACAATAACTTTGAAGGTTCCAGAAGGTTCCAATGATGTCCTGCTCAAAAATCTCTACTTGTCTTGTGACCCATACATGAGGAATCTTATGAACAAGCCTGAAGGCCCTCCCAATCCTCGTTCTTACACTCCTGGCTCCCCATTAACAGGATATGGTGTGTCTAAAGTTCTGGAATCTGGACACCCAGATTATAAGGAGGGTGATTTGGTGTGGGGCTTTACCAAATGGGAAGAGTATAGCTTGTTACCCTCAGCTCAAATACTTTTCAAAATTGAGCACACTGATGTGCCACTTACCTACTACACTGGAATTCTTGGTATGCCCGGAGTGACTGCATATGCAGGTCTGTTCGAAGTAGGCTCTCTCCAGAAAGGAGAGAAGGTTTTTGTTTCAGCTGCCTCAGGTGCAGTTGGTCAACTTGTTGGGCAATTCGCTAAACTGAATGATTGCTATGTAGTTGGAAGTGCTGGAACTAAAGAGAAGGTCGATCTCCTGAAGAATAAATTTGGATTTGATGGAGGCTTTAACTACAAGGAAGAGCCTGACCTTGATGCAGCTTTGAAAAGGCACTTTCCAGAAGGCATTGATGTTTACTTTGAGAATGTTGGGGGCAAGACACTTGATGCAGTACTCCTGAATATGAGACTCCATGGTCGAATACCAGCATGTGGAATGATCTCACAGTATAATCTTACTCAACATGAAGGTGTCGCAAATTTGGCACATATCATATATAAGCGAGTTCGTTTGCAAGGCTTTAACTTCATTGATTTTATTTACCTATATCCCAAATTCTTGGAGTTTCTTCTGCCTAATATCAGAGAAGGGAAGGTTGTGTATGTGGAAGACATAGCTGAGGGTCTTGACAATGGACCTGCAGCCTTGGTTGGCCTCTTTAGCGGCCGCAATGTTGGAAAACAAGTGCTTGTTGTTGCACATGAATAG 1032 0.4322 MAQVRNKQVLLRDHVTGFPKESDMNIVESTITLKVPEGSNDVLLKNLYLSCDPYMRNLMNKPEGPPNPRSYTPGSPLTGYGVSKVLESGHPDYKEGDLVWGFTKWEEYSLLPSAQILFKIEHTDVPLTYYTGILGMPGVTAYAGLFEVGSLQKGEKVFVSAASGAVGQLVGQFAKLNDCYVVGSAGTKEKVDLLKNKFGFDGGFNYKEEPDLDAALKRHFPEGIDVYFENVGGKTLDAVLLNMRLHGRIPACGMISQYNLTQHEGVANLAHIIYKRVRLQGFNFIDFIYLYPKFLEFLLPNIREGKVVYVEDIAEGLDNGPAALVGLFSGRNVGKQVLVVAHE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01412 343 Gene3D - 8 338 - -
Cca01g01412 343 SUPERFAMILY GroES-like 3 170 IPR011032 -
Cca01g01412 343 Gene3D - 133 309 - -
Cca01g01412 343 SMART PKS_ER_names_mod 30 338 IPR020843 GO:0016491
Cca01g01412 343 CDD double_bond_reductase_like 4 340 - -
Cca01g01412 343 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 1 343 - -
Cca01g01412 343 Pfam N-terminal domain of oxidoreductase 7 115 IPR041694 -
Cca01g01412 343 PANTHER PROSTAGLANDIN REDUCTASE 1 343 IPR045010 GO:0016628
Cca01g01412 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 301 IPR036291 -
Cca01g01412 343 Pfam Zinc-binding dehydrogenase 165 297 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01412 Cca-Chr1 28776598 28780216 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01412 K19825 - gmx:100809668 659.062