Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01402 ATGGCCATTCAAGCTTTTCATAGCTCTGCATGTTACTTCCACTCCCACCTTCTTCACTCTTATTCCACCACTGCATATCCACCATTCCTTGCTTCAAGGAGGTTCCAATTATGCCCTTCAGCAAGAAAACCTCTCAAGTTGAGCTGCAGTTCGAGTGGCAACAATGGTGACCAAGATTACCTTCTGGATGCTCCAGTCTCTGTAGGAGATGGATTCTCTTTTAGTGGAGGAAAGTATTCAGATGGGCCTAGTCCAAGCGATGAATGGTTTAAGCAAGGGAAAAAGGTTAAAGCCTATTCAATTCCTGGCACTGGTGAAAAAGCAAAAGATCCAATTTTTGGACTTGCTATGGGTGCTGGGTCTCAAGCTACTGGTGATCGTTACAGATGGTTTTGTGTTGAAAGCGGAAGTACTGATAATCCTCCAGTGATACTAATCCATGGTTTCCCTTCACAGGCATATTCTTATCGCAAAGTTCTTCCAGTACTCTCCAAGGACTATCATGCTATAGCATTTGACTGGCTAGGATTTGGGTTTTCTGATAAGCCTCAACCAAGATATGGGTTTGACTACACACTGGATGAATATGTGTCATCATTGCAGTCACTTATTGATGAATTGGCTGTTACAAAAGTCTCACTTGTTGTCCAGGGATATTTTTCGCCTGTTGTAGTTAAGTATGCCAGCATTCACCAAGAAAAGCTCAGCAACTTAATACTCCTTAATCCACCTCTAACAGCCCAACATGCCAAGCTTCCACCAACATTGTCCATTTTCAGCAACTTTCTGCTAGGTGAAATATTTTCACAGGATCCATTAAGGGCCAGTGACAAAGCTCTAACAAGCTGTGGCCCCTATAAAATGAAAGAAGAAGATGCAATGGTCTATAGAAGACCCTATCTCACATCTGGTTCCTCAGGCTTTGCACTGAATGCAATTAGCAGGAACATGAAGAAAGACCTCAAGAGATATGTGGAAGATATGCATACAATACTTAAGGACAAAAATTGGAAAGTTCAAACCACAATATGTTGGGGCCAAAGGGACCGCTGGTTGAGCTATGATGGAGTGGAGGATTTCTGCAAGGATTCCAACCATAAACTCATTGAAGTTCCTACGGCCGGCCATCATGTGCAGGAAGATTGTGAAATGTGCTTTTTCAAAAGGTAA 1170 0.4256 MAIQAFHSSACYFHSHLLHSYSTTAYPPFLASRRFQLCPSARKPLKLSCSSSGNNGDQDYLLDAPVSVGDGFSFSGGKYSDGPSPSDEWFKQGKKVKAYSIPGTGEKAKDPIFGLAMGAGSQATGDRYRWFCVESGSTDNPPVILIHGFPSQAYSYRKVLPVLSKDYHAIAFDWLGFGFSDKPQPRYGFDYTLDEYVSSLQSLIDELAVTKVSLVVQGYFSPVVVKYASIHQEKLSNLILLNPPLTAQHAKLPPTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYKMKEEDAMVYRRPYLTSGSSGFALNAISRNMKKDLKRYVEDMHTILKDKNWKVQTTICWGQRDRWLSYDGVEDFCKDSNHKLIEVPTAGHHVQEDCEMCFFKR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01402 389 SUPERFAMILY alpha/beta-Hydrolases 123 382 IPR029058 -
Cca01g01402 389 Pfam alpha/beta hydrolase fold 141 380 IPR000073 -
Cca01g01402 389 Gene3D alpha/beta hydrolase 120 386 IPR029058 -
Cca01g01402 389 PANTHER EPOXIDE HYDROLASE 51 384 - -
Cca01g01402 389 PRINTS Alpha/beta hydrolase fold signature 341 355 IPR000073 -
Cca01g01402 389 PRINTS Alpha/beta hydrolase fold signature 166 181 IPR000073 -
Cca01g01402 389 PRINTS Alpha/beta hydrolase fold signature 228 241 IPR000073 -
Cca01g01402 389 PANTHER HYDROLASE-LIKE 51 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01402 Cca-Chr1 28310265 28320047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01402 134 272 Acyl Lipid Metabolism Gene Families AT3G05600 27.564 2.95e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01402 - - gmx:100809126 729.939