Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01389 ATGAAGGAACTGCAGTTGTTGAATGAGAAATGCAAACTGGAGAGGCAATTCTCTGAACTAAGAATGGCAGTTGACGAGAAGCAAAATGAAGCTATCTCGTCCGCGTCTAATGATTTGGCTCGAAGAAAAGGTTATCTTGAAGAAAATTTAAAACTTGCCCATGATTTGAAAGCTGTAGATGATGAAAGATATATCTTCATGTCATCTATGCTGGGGTTGCTTGCTGAATATGGTCTTTGGCCTCGTGTTATGAATGCCTCTTCAATATCCAGCTGTGTAAAGCACTTACATGATCAGTTACAATGGAGGATTCGGAGTTCACATGATAGAATTGGAGAGTTAACTTCTGTGCTAGAAAGCCGTGCTGATAATGGTAATCATGTTGTTGAAAGCCCAGGTTCTGGAAATTTGACAAGTCACATTCATAATGATTTCATGTTTCAGCATAACTTCCCCCAGCAAAATCTTATTGGGAATGAACAAAATCATCAGCCAATGAACAATATGGCAGGATATGTGCACCCAGCTCTTAATGCTGATGTCAACTGGGCATTCAAAAGGCCGGTCAACTATCAGCAGATTTCTAAGGCTGATAGGGAGGTATCTTCTTTCCCACATGGTTCAATTGATAAAATTGGAGTACAGGACAAAACCATGGAAAGAAATTTTGTCAATGGAAACTTCTATCAATCCCCACCTGAGCTGGATGAAACTGCTTTCCTTATTGCTGAGGATGGCCCTGGAATTGAGAATTTTCAAATTTCTGGTGATGCTATTCCTGGAGAAAAGCTTCTTGGATGTGGATATCCAGTTCGTGGAACATCTCTTTGTATGTTTCAGTGGGTTCGGCATCTTGAGGATGGCACTAGACACTACATTGAAGGAGCCACAAATCCAGAGTATGTAGTTACAGCTGATGATGTTGATAAATTGATAGCGGTTGAATGTATTCCAATGGACGATAAAGGCCATCAGGGGGAACTGGTGAAGCTTTTTGCTAATGATCAGAATAAAATTAAGTGTGATTCAGAAATGCAGCATGAGATTGACACAAATCTGTCTAAAGGAGATGCAACATTCAGTGTTCTACTTTTGATGGATTCTTCCGAAAATTGGGAACAAGCAACTCTATTCTTAACAAGATCTGGATATGATATTAAGATTAATGGTACTGAAACTGCAGTAGTTGCTGAGAAATTTTCAAAGGACTTATCGATTAAGGTTCCATGTGGCCTTTCAACACAATTTGTGTTAACATGCTCGAATGGGTCTTCTCATCCTCTAAGCACATATAGCGTCAGAATTCGTGACACACTTGTATTAACCATGCGAATCTTCCAGAGTAAGGCATTGGATGAGAAAAGGAAAGGGAGAGCGTGA 1380 0.3986 MKELQLLNEKCKLERQFSELRMAVDEKQNEAISSASNDLARRKGYLEENLKLAHDLKAVDDERYIFMSSMLGLLAEYGLWPRVMNASSISSCVKHLHDQLQWRIRSSHDRIGELTSVLESRADNGNHVVESPGSGNLTSHIHNDFMFQHNFPQQNLIGNEQNHQPMNNMAGYVHPALNADVNWAFKRPVNYQQISKADREVSSFPHGSIDKIGVQDKTMERNFVNGNFYQSPPELDETAFLIAEDGPGIENFQISGDAIPGEKLLGCGYPVRGTSLCMFQWVRHLEDGTRHYIEGATNPEYVVTADDVDKLIAVECIPMDDKGHQGELVKLFANDQNKIKCDSEMQHEIDTNLSKGDATFSVLLLMDSSENWEQATLFLTRSGYDIKINGTETAVVAEKFSKDLSIKVPCGLSTQFVLTCSNGSSHPLSTYSVRIRDTLVLTMRIFQSKALDEKRKGRA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01389 459 PANTHER EXPRESSED PROTEIN 1 458 - -
Cca01g01389 459 Gene3D - 246 327 - -
Cca01g01389 459 PANTHER EXPRESSED PROTEIN 1 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01389 Cca-Chr1 27438272 27465964 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01389 - - gmx:100813936 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01389 01 27438272 27465964 Cca01g01389 01 27438272 27465964 ECH