Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01371 ATGTCTTCAAGTCCCGGTTCTTACCCCATCAAAACGATCGTCGTTTTGGTTCAAGAAAACCGCTCCTTCGACCACATGTTAGGTTGGATGAAGTCCCTTAACCCGGAAATCGACGGGGTCACCGGTTCAGAGTCGAACCCGGTTTCCACATCGGACCCGAACTCGAACCGGGTTCATTTCAACGACCAGTCCGGTTTTGTTGAACCGGATCCGGGTCACACGGTGGAGGATGTCTATGAACAAGTTTTCGGCGAGCCTTGGAGCGAAGCCTCGGCGGCAAAGAATTTGCCGCCCAGCATGCAAGGCTTCGCGCAAAACTCGGCGAAGCAAGTGAAAGGGTCGACGGCGGAGACGGTGATGAACGGGTACAAACCGGAGGTGTTACCGGTTTTTAGGGAGTTAGTTAAGGAGTTTGCGGTTTGTGATCGGTGGTTCGCGTCGGTTCCCGGTCCGACCCAACCGAACCGGCTTTACGTGCACTCTGCGACGTCGTATGGGTTGACGACTCAAGATACAAAGAAACTAATTGGTGGTTTGCCGCAGAAGACTATATTCGATTCTTTGGACGAAAATGGGTTTAGTTTTGGAATATATTATCAGTACCCGCCATCAACTCTTTTTTATAGAAATCTCAGGAAACTGAAATACGCAGACAACTTCCTACCATTCGATTTAAAGTTCAAGAAGCATTGCGAAGAAGGGAAATTGCCAAACTACGTGGTGATTGAACAAAGATACTTTGACTTGTTGTCACTGCCCGCGAATGATGATCATCCATCTCATGATGTTTCCGAGGGACAAAGATTTGTGAAGGAAGTGTACGAGGCACTAAGAGGTAGTCCACAGTGGAATGAAATCTTGTTTGTGATCACGTACGATGAACATGGTGGCTTTTATGATCACGTGCCAACTCCAGTGGTTGGAGTGCCACGCCCAGATGACATTGCAGGTCCTGAACCAATGAAGTTTCAGTTTGATAGACTTGGTGTAAGGGTTCCTACTATCATTGTTTCTCCATGGATTGAGCCAGGAAAAGTGTTGCATGAACCTTCAGGGCCATTCCCAACATCACAGTATGAACATTCGTCTATACCAGCGACCGTTAAGAAAATATTCAACCTGCCTCACTTTTTGACAAAGCGTGATGAATGGGCTGGAACACTCGAGGAACTCTTATCTCTAACTACCCCACGAATTGATTGTCCAGAGAAATTGCCTGAGCCCGTGAAATTGCGAGAGGTTGGTGCTGTAGAAGAGGCACCATTGAGTGAATTTCAGGAAGATTTGATATATATGGCAGCAACTCTAAATGGGGATCATAGTAAGAGTATATACTGCAACAAGCTAACAGAGAACTTAAAAGTTTCAGAGGCAGTTAAATACTGTGAAGGTGCATTTGGAACATTCTTGAATGAGTGTGAGAAAGCAAAGCAAAGTAGAATTGATGGATCTGAAATTGTTCACTGTGCTAGACCGCATTCGGCACCACAATCCAAAACGTTCTTGCACAAGATGTTGTCTTGTATATTGTGTAATTGA 1539 0.4581 MSSSPGSYPIKTIVVLVQENRSFDHMLGWMKSLNPEIDGVTGSESNPVSTSDPNSNRVHFNDQSGFVEPDPGHTVEDVYEQVFGEPWSEASAAKNLPPSMQGFAQNSAKQVKGSTAETVMNGYKPEVLPVFRELVKEFAVCDRWFASVPGPTQPNRLYVHSATSYGLTTQDTKKLIGGLPQKTIFDSLDENGFSFGIYYQYPPSTLFYRNLRKLKYADNFLPFDLKFKKHCEEGKLPNYVVIEQRYFDLLSLPANDDHPSHDVSEGQRFVKEVYEALRGSPQWNEILFVITYDEHGGFYDHVPTPVVGVPRPDDIAGPEPMKFQFDRLGVRVPTIIVSPWIEPGKVLHEPSGPFPTSQYEHSSIPATVKKIFNLPHFLTKRDEWAGTLEELLSLTTPRIDCPEKLPEPVKLREVGAVEEAPLSEFQEDLIYMAATLNGDHSKSIYCNKLTENLKVSEAVKYCEGAFGTFLNECEKAKQSRIDGSEIVHCARPHSAPQSKTFLHKMLSCILCN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01371 512 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 6 495 - -
Cca01g01371 512 Pfam Phosphoesterase family 10 375 IPR007312 GO:0016788
Cca01g01371 512 Gene3D Alkaline Phosphatase, subunit A 2 185 IPR017850 -
Cca01g01371 512 Gene3D Alkaline Phosphatase, subunit A 237 416 IPR017850 -
Cca01g01371 512 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 6 495 IPR007312 GO:0016788
Cca01g01371 512 SUPERFAMILY Alkaline phosphatase-like 122 375 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01371 Cca-Chr1 26852926 26857468 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01371 6 510 Acyl Lipid Metabolism Gene Families AT3G03530 62.808 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01371 K01114 - gmx:100789421 922.154