Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01360 ATGGAGATGACACCGAAGGAGCACATTGAGAATATACGAAGGAGCAAATACTCGATTGGGGGAGAACCAAACCCACTGCGTGAGGACTTGCACCAAGCCACAAAGAACCTCTCCACTGAGCTTTATGCCAAAGATGTTCATTTTCTCATGGAGCTCATTCAGAATGCTGAAGATAACAAGTATGCTGAAGGAGTGAGTCCATCACTTGAATTCATCATAACATCAAAGGACGTAACAGCCACTGGAGCTGAAGCCACATTACTAATTTTCAACAATGAAAAGGGTTTCTCTACCGAAAACATTGAATCTATATGCAGTGTTGGACGGTCCACAAAGAAAGGCAACAGGAGTAGTGGTTACATAGGCGAGAAAGGAATTGGTTTCAAGAGTGTATTTCTGCTTACTGCTCATCCTTATATATTTAGCAATGGATATCAGATACGGTTCAGTGAGAAACCTTGTCCACACTGTGACATCGGGTATATAGTTCCTGAATGGGTTGATGAGAATCCATCCCTTGATGACATAAAGCAGATATATGGTGCTGGTTCCCTCCCAACTACCACAATTGTCTTACCTCTAAAGCCAGACAAGGTCAAACCTGTGAAGCAACAGCTCTCAAACATTCATCCAGAAGTTCTGTTGTTCCTTTCAAAAATCAGACACCTGTCTGTAAGGGAAGATAATGAGGATCCCAAGCTGAATACTGTGAATTCTGTATCTATTTCTAGCGAGAAAGAATTTTGCACTAGGAAAAACATGAATGCTGAGTCCTACACACTTCATCTCTCTGCTGAGGAAAATGGTGGTTCTGGAAAGGAATGCAGCTACTATATGTGGAAGCAAAAGTTTCCTGTGAGGTTGGAAAATGTGGTGGAAAGGAGAGAGGATGTGGAGGAGTGGGTTGTAACATTAGCCTTTCCAAATCAGGAGAGGCTTCATAGGGGAAGGAGCTTACCTGGGGTCTATTCATTTCTTCCCACAGAGATGGTCACTAATTTTCCCTTTATAATTCAAGCAGATTTTGTCCTGGCCTCATCAAGGGAGACAATTCTCTTGGACAATAAGTGGAACCAAGGGATACTGGAATGTGTTCCATCAGCTTTTATGGGTGCATTGAGAACACTTGTCATTGGATCAGATCAAGCTCCAATATTCAGTTTACCCCCCTTCTTCAGGTTCCTTCCCACTGATAGTTCTCCTTTTGAAAAGTTAAATTGTGTGAGGGAGAAAATCAAACAAAAAATGCTTCAAGAAAGCATTATTCCTATTGAGACATACAAGGAGCAGAAGCACTTCTATAAGCCTTGTGAAGTTGGCAGGCTACTGCCCGAATTCTGGGACATTTTGGCTGAGGCTCAGGAAGAAGGAGTATACTTGCATAACCTGTCATCTCACAATGGGAGGAAAATCTTGAGTTCTTCATTTGATAAAACTGAGTATGATCACATTCTCAACTTTTTAGAGGTAAAAGAAGTTGACACTGATTGGTATGCAAAGTGCATCCAAAGTTCTAATCTTGTGGATGGAGTACCAGATGTTGTTTATCTGAAGCTTTTACTGTTTATTGCCACAAATTGGTTCAGATTTAAAAGCTCCAACATGATGGACATTCCATTAATTAAATATGTGGATTCTGACGGGAAATTGTCCCATTTCACTCTTGATCAATGCAACAACCGCTATGGGGCCAAGCAAATAGTCCTAGCAGATCCAAGTCCATCTTGTCCTTGCTCTTGGCTGATTGATTGGAACGGCGAATTTGAATGTAAAACCTCCCGATTTTTTATGCCAGAAGTAACACAACAAGCTATCTTGTGTTCGCCCCGCAGGCAGACTTTGTTGGAATGGCTAGAAAATCAGGTTCATGTTACTACTTTGAAGGTGTACACTTTTGCAAAAGTCCTTTGTAGTTCTATAAAAAGTAACTCCAAGCTTGCCATTAAATATACTCATTTCTTATATCACTCTTTCTCAAAGAGATATTTATCAGACAGTGAGGTTAATGATTTGTGTCGTTCCATGCCACTTGTGGACAACTATGGACATGTGACTGAATGCAGAAAAGGAGTTCTTGTGCCTGCAAATGTGAGCAAATGGGCAGACTTGATTGTTTCCAATCCATGGAGAAATGAAAATTATGTTGAGCTGGGAAAGGAGTACCTGAATCCATCTCATTATGCAGGCCAATACACTGGTTCTGGGAAGCTCATAGAATTCCTCAAAAATCATGTTGAGGCTTCTGATATACCTTATATATACCCTCCAAATGCTGGGTTTTCTGCTGTTGATACACCACTTACCAAAGGCAATGCCTTTTTGCTTTTGGATTGGATTCGAAACCTGAAGTATAGAGGTGTGCATCTACCAGAGAGGTTCTTGAAATGCATAAAGGAAGGAAGTTGGCTTAAAGTTACTGCCATTGGATGGAGGCCACCTTCAAAATCCTTCTTAATTGGCTCATCATTGGGAAGAATTTTGCAAAGTGGTTCTGTTCTTGTTGATATTCCACTGATTGATGAGAGCTTCTATGGGAATCAAATAAATGGGTACAAGGAGGAGTTGAAAACAATTGGGGTGATGTTCAGTTGTGAGGAAGCATGTCAATTCATTGGAAGAGAACTAATGTCTCGTGCAGCTTCTTTTACTTTAAGCAGTAGTCATATTCTTTTGATGCTTGAATTCATCCAACATCTGAGGCAAAATTATCTTCCTTTAGACGATTTTGTCAACAGCATCAAAGAGGAAAGTTGGCTAAGGACATCTAATGGTCTCAGGTCTCCTATAGGATCTGTATTGTATGATTCAGGATGGCAAGTTGCTTCACAAATTAGTGCTATCCCTTTCATTGATAAGGGCTATTTTGGTGAGGAAATTTATAATTTTAAAGAGGTGCTCGAGTTGTTGGATGTTGTAGTTGGCTTCAATGGAAACTACCAAGTTATTATTGACCATTTAAAATCACCCTCAGATTTGGTCAATATGACAGCTGAGGCTGTTCTTTTGATAATGGAATGTATACGATTCTCGCGTGCCTCTAGTAAACTCATAAACCCACTCAGGGGAACAAACTGCTTGAAGACAAACATGGGTTTCAAAGCACCAGATGAATGTTTTTTGTATGATCCTGTATATGGCTGCATTTTGGAGGTATTCGATGGTCTTCCTGTGATAAATAGTAAATTCTATGGAGAGAAAATTTTCACATACAAGGATGAATTGAAGCAAATGGGAGTGGTGGTTGACTTTATGGAGGCTATCCAAAAAGTTGAGCATCTCTTCAAACAGAAGGCGTCAGAGACTTCCTTAAACCCACAGAATGTTCTATCATTTCTTTCATGCTGCAGGTTGCTGAAGGGAACTGGATGTGAATTCCCTTCCAGTTTCTCATTAATCATTGGTGATATGAAGTGGTTACAAACTGTGGTTGGTGATCATAGGCGTCCAAGAAAATGCATTCTATATGGTCCAGAGTGGAAAGCCATCTCTTCAATAGCTCGTCTCCCTTTCATTGATGAAAGTGACAATTGCTACGGTAAGGGAATACATGAATATAAGGAAGAGCTGAAGAGCATTGGTGTTGTTACTCAACTGAAAGACGGGGTGAAGTTTCTTCCTAAATACTTGAATTTTCCTTCAGATCCTTCCACTATTACTCCTGAGAGTGTGTTTTCATTGCTAGAATGCATCCGTGTTCGAATGCAAGGGGGCATTCTCTCCATTGGAGATGACTTCAAGAAAAAAATGTCTAGAAATTGGTTGAAAACACATGCTGGTTATAGGCCTCCAGAAAAGTGTTTGTTGTTTGATTCCGAGTGGAATTTGTACCTCAAGCCAACTGATGGGCCTTTCATTGATGAGGGTTTTTATGGACATGAAATTGCTTCTTACAAGAAAGAACTCAATGCAATTGGAGTCACCATTGATGTTGAAAAAGGGTGCTTCTTGGTCGCTAGTCACCTTGACTCTCTCTCTGATGATGACACCATTGTGCAAATATATAGGTACTTGAGTGAACACAAGTGGAAACCTGAGAAAAAGGCTTCCAGAAAGATTTGGATTCCAGAAAGTGCAAAGTGGGTCCATTCTGGACAATGTGTCATACATGACCAGGATAATCTCTTTGGTTCAAAGTTTTATGTTCTGGGGGATATTTATGAAGAGAAGATTCTTCAATTTTTCTCTATTGCCATGGAAGTCCGGAACAAACCCTCACTTGATGATTATGTCAACCTTTGGAATGATTGGGAGAGTTCAGTGGAACAGTTGTCATATGACAAGTGCTGTAAGTTCTGGATGTTTATGTTGAAACATTCAACAAAAAAAACCGGGGAGAAACTTTCTGACTGCTTAGAGAAACTTTCTGACTGCTTAGAGAAACTGCCTGCAACATCAGGCAACAATGAGATATTTTTGTTAGATAAGAATGATGTTTTTATTCCTGATAACCTTCATCTGAAAAAGCTTTTTGAGCAGGAGAAAGTCTTTGTCTGGTATCCTCAAAACTTGGCACCAGTATCCAGGTGTGAATTGTTTGACATGTACAGAAAAATTGGTGCTAGAAATATCTCTGAATCTCTATGCAAGGAAGAGTCATCCTTACTCAATGGTGTTCAACTCAAGCAGGTTAATCCTGATAGTATTTGTAATGTAAAGGGATTGGTTAAGCTTATTCTTGGTTTTCTTTCTTGTTCTAGCCTAAAAATGGAACCAAACAGGAGGCATGAAGCTGTTCAAGCTCTACTCAACCTGAGTTTTTTTGAGACTATGGATTCAGTCACTGTAAGTTACAGTTTGAAACTATCATCAGGGAAAATCATTACCAAAACTGCAGACAGAATGGTACAGTGGGAAAGGCAAAGTTCCAAGTTTTTCACCGAATTGAACTGGCAAAATGGCAATGCAAGTTTAATAAAATATGCCACATATTTCTCAGAAGCCATATCAGAGGGCATTTTGTGCGAGAATCATGATCATGTTCCTGCACTCTCTGAGCTCATCACATTAGCTTTTCTGCTGAAATTCAACAATGAAGAAATTGAATTTCTTATGGAGTCCAGGAACTTGCACTGTGAGGATGATGAGTTCCTCAATTCTTCCTTCCCATCTGATTAA 5115 0.3988 MEMTPKEHIENIRRSKYSIGGEPNPLREDLHQATKNLSTELYAKDVHFLMELIQNAEDNKYAEGVSPSLEFIITSKDVTATGAEATLLIFNNEKGFSTENIESICSVGRSTKKGNRSSGYIGEKGIGFKSVFLLTAHPYIFSNGYQIRFSEKPCPHCDIGYIVPEWVDENPSLDDIKQIYGAGSLPTTTIVLPLKPDKVKPVKQQLSNIHPEVLLFLSKIRHLSVREDNEDPKLNTVNSVSISSEKEFCTRKNMNAESYTLHLSAEENGGSGKECSYYMWKQKFPVRLENVVERREDVEEWVVTLAFPNQERLHRGRSLPGVYSFLPTEMVTNFPFIIQADFVLASSRETILLDNKWNQGILECVPSAFMGALRTLVIGSDQAPIFSLPPFFRFLPTDSSPFEKLNCVREKIKQKMLQESIIPIETYKEQKHFYKPCEVGRLLPEFWDILAEAQEEGVYLHNLSSHNGRKILSSSFDKTEYDHILNFLEVKEVDTDWYAKCIQSSNLVDGVPDVVYLKLLLFIATNWFRFKSSNMMDIPLIKYVDSDGKLSHFTLDQCNNRYGAKQIVLADPSPSCPCSWLIDWNGEFECKTSRFFMPEVTQQAILCSPRRQTLLEWLENQVHVTTLKVYTFAKVLCSSIKSNSKLAIKYTHFLYHSFSKRYLSDSEVNDLCRSMPLVDNYGHVTECRKGVLVPANVSKWADLIVSNPWRNENYVELGKEYLNPSHYAGQYTGSGKLIEFLKNHVEASDIPYIYPPNAGFSAVDTPLTKGNAFLLLDWIRNLKYRGVHLPERFLKCIKEGSWLKVTAIGWRPPSKSFLIGSSLGRILQSGSVLVDIPLIDESFYGNQINGYKEELKTIGVMFSCEEACQFIGRELMSRAASFTLSSSHILLMLEFIQHLRQNYLPLDDFVNSIKEESWLRTSNGLRSPIGSVLYDSGWQVASQISAIPFIDKGYFGEEIYNFKEVLELLDVVVGFNGNYQVIIDHLKSPSDLVNMTAEAVLLIMECIRFSRASSKLINPLRGTNCLKTNMGFKAPDECFLYDPVYGCILEVFDGLPVINSKFYGEKIFTYKDELKQMGVVVDFMEAIQKVEHLFKQKASETSLNPQNVLSFLSCCRLLKGTGCEFPSSFSLIIGDMKWLQTVVGDHRRPRKCILYGPEWKAISSIARLPFIDESDNCYGKGIHEYKEELKSIGVVTQLKDGVKFLPKYLNFPSDPSTITPESVFSLLECIRVRMQGGILSIGDDFKKKMSRNWLKTHAGYRPPEKCLLFDSEWNLYLKPTDGPFIDEGFYGHEIASYKKELNAIGVTIDVEKGCFLVASHLDSLSDDDTIVQIYRYLSEHKWKPEKKASRKIWIPESAKWVHSGQCVIHDQDNLFGSKFYVLGDIYEEKILQFFSIAMEVRNKPSLDDYVNLWNDWESSVEQLSYDKCCKFWMFMLKHSTKKTGEKLSDCLEKLSDCLEKLPATSGNNEIFLLDKNDVFIPDNLHLKKLFEQEKVFVWYPQNLAPVSRCELFDMYRKIGARNISESLCKEESSLLNGVQLKQVNPDSICNVKGLVKLILGFLSCSSLKMEPNRRHEAVQALLNLSFFETMDSVTVSYSLKLSSGKIITKTADRMVQWERQSSKFFTELNWQNGNASLIKYATYFSEAISEGILCENHDHVPALSELITLAFLLKFNNEEIEFLMESRNLHCEDDEFLNSSFPSD 1704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01360 1704 MobiDBLite consensus disorder prediction 1 24 - -
Cca01g01360 1704 Gene3D - 10 218 IPR036890 -
Cca01g01360 1704 MobiDBLite consensus disorder prediction 1 15 - -
Cca01g01360 1704 PANTHER ATP/DNA BINDING PROTEIN-RELATED 6 1700 - -
Cca01g01360 1704 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 30 217 IPR036890 -
Cca01g01360 1704 PANTHER WU:FJ29H11 6 1700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01360 Cca-Chr1 26337579 26349613 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01360 - - gmx:100800765 2841.6