Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01355 ATGCTTTCCATTTGGTATGCTAAAATTCTTGATAAAACTGTTCTTTGGTATGCCAATGGAGACACTCCTGCACCAAAGGGGTCAAAGGTTGAACTCACTTCTAATGATGGGTTAGTGTTCACTACCCCAAATGGAGATCAGTTGTGGAAAAGTGAGTCCTTTAATGGCAAAGTTGCACATGGTTTCTTAAAGGACATTGGCAACTTTGTGCTTGTGGATGAAAACCATGAGGGTGTGTGGGAGACTTTCAAGGATCCAAGGGACACCTTGTTGCCCTCACAAACTCTTGAAAAGGATGAGAAGCTTTCTTCTAGGTTTCTAGAGTCAAATTTCTCCAAGGGAAGTCTTGGAATTCAGTTGGTGTTTGAACCATCAAGGTATGTGTATGTTTTAAGGAAGAACAATGAGAAATATAACTTGTCAACATGGAGTGGAGCCTCCACTAATGAGTCTTACTTTAGAGCGACTTTTAATTTTGATAGGGTGCTTATTCTCTATCAGCTTGCAAATAGTTCCTTTGGGAGTGATGGTTGGAGTCCTATTTGGTCTCAACCAGATAACATTTGTGTCAGCAGGGTTTCTACTAAAGGTAGTGGTGTTTGTGGGTTTAATAGTGTTTGCACATTGGGAGATGATCAAAGGCCAATTTGCCAATGCCCAAAATGGTACTCTTTGGTTGACACTAATGACCCCAATGGTAGCTGCAAGTCAGACTTCATACAAGGATACGTAGAAGATGAGCTTATTAGGAGGAAAGAAGATGTTGATGAATATGATTTTGAGGTGATGATAAACACAAATTGGCCTCTTTTAGATTATGTTCTTCTTAAGCCTTTTACTGAGGAACAATGTAAAAAGTCATGTTTGGAAGATTGTATAAGTGTAGTTACCATTTTCAGATCAAGTAATGGCTTCTTCAAGAAGAAGTTACCTCTTTCAAATGGTAAAGTTGATGTTGGACTTAATGTTGCCAAGACCTTCATCAAAGTGTGGAAGGATAATTTCTCTTTGGTTGTTCCATAA 1023 0.3891 MLSIWYAKILDKTVLWYANGDTPAPKGSKVELTSNDGLVFTTPNGDQLWKSESFNGKVAHGFLKDIGNFVLVDENHEGVWETFKDPRDTLLPSQTLEKDEKLSSRFLESNFSKGSLGIQLVFEPSRYVYVLRKNNEKYNLSTWSGASTNESYFRATFNFDRVLILYQLANSSFGSDGWSPIWSQPDNICVSRVSTKGSGVCGFNSVCTLGDDQRPICQCPKWYSLVDTNDPNGSCKSDFIQGYVEDELIRRKEDVDEYDFEVMINTNWPLLDYVLLKPFTEEQCKKSCLEDCISVVTIFRSSNGFFKKKLPLSNGKVDVGLNVAKTFIKVWKDNFSLVVP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01355 340 Gene3D - 3 115 - -
Cca01g01355 340 ProSiteProfiles Bulb-type lectin domain profile. 1 84 IPR001480 -
Cca01g01355 340 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 1 114 - -
Cca01g01355 340 PANTHER - 1 114 - -
Cca01g01355 340 Pfam D-mannose binding lectin 13 101 IPR001480 -
Cca01g01355 340 PANTHER - 117 335 - -
Cca01g01355 340 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 117 335 - -
Cca01g01355 340 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 88 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01355 Cca-Chr1 26125403 26126538 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01355 - - pvu:PHAVU_010G032000g 531.561