Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01351 ATGGGGTCACCAAAGGAGCATATTGAAGAAATACGAAGGAACAAATTTTCAATTGGCAAGGAACCCAACCCTCTAATAGAAGATTTGCACCAAGCTGTTAAGAATCTCTCCGTTGAACTTTATACCAAAGATGTCCATTTTCTAATGGAACTCATTCAGAATGCAGAAGACAATGTGTACTCTAAAGGAGTGAAACCTTCGCTTGAATTCATAATAACTTCAAAGGACATAACATCTACTGGTGCTGCAGCTACATTGCTGATTTTCAACAATGAAAAGGGTTTCTCTGCCAAAAACATTGAATCTATATGCAGCGTTGGACGGTCCACAAAGAAAGGCAAAAGGAGCAGTGGTTACATTGGCGAGAAAGGAATCGGTTTCAAGAGTGTATTTCTGGTGACTACTGAGCCTTATATTTTCAGTAATGGATATCAGATACGGTTCAATGAGAAGCCTTGTCCACATTGCGGACTCGGGTATGTAGTTCCTGAATGGGTTGAGGAGAAGGCAACCCTTGAAGACATAAAGAATATATATGGTGCCCGTGATGGTTCCATTCCAACTACAACAATTGTCTTACCTCTCAAGTCTGATAAGGTTAAACCTGTGAAACAGCAGCTCTCAGACATTCACCCAGAACTTTTGTTGTTCCTTTCAAAGATCAGACACCTTTCTGTCAGAGAAAACAATGAGAATCCAAAGCTGAATAGTGCAAATGCTATTTCTATTTCAACTGAGATTAACTTTGTCACAAGGAAAAACATGAATGCTGAGTCGTACACGCTGCATCTCTCTGCTGAGGAAAATGGTGGTTCTGAGAAGGAATGCAGCTACTATATGTGGAAGCAAAAGTTCCCTGTGATGTTGGAAAATGTGGTTGAAAGGAGAATGGGTGTGGAGGAGTGTGTTGTTACATTAGCCTTTCCAAATCAGGAGAGGCTTCATAGGGGAAAAACCTCACCTGGGGTCTATGCTTATCTTCCAACTGAGATGGTCACTAATTTCCCTTTCATAATTCAAGCAGATTTTGTCCTTGCCTCTTCAAGGGAGACAATTCTCTTGGATGATAAGTGGAACCATGGAATACTTGAGTGTGTTCCCTCAGCTTTTGTAGATGCTTTCAAAACATTGATCATTGGATCCAATCAGGCACCTGTGTCCACTTTGGCAGAGATGTTCAAATTCATTCCCATTGAAACTTCTCCTTATCAAAAGTTAAATAATGTGAGGGAGAAAATCAAAGAGAAACTCGTTGAAGAAAACATAATTCCTATAGAGACATACAAGGTGCAGAAGTACTTCTATAAGCCTCGTGAAGTTGGTAGGCTAGATTCTGAATTCTGGGACATTTTGGATAAGGCTCGGGCAGAAGGAGTATACTTGCATAACCTGTCATCTCATGGATGGAAAATTTTGAGTTCTTCACTTGACATGAGCAAGTATGATGGGATCCTTAACTTTTTAGGTGTACAACAGGTCAAATTAGATTGGTATGCAAAGTGCATTCAGAGTTCCAATCTTGTGGGTGGAGTCTCTGAAGAGGCCTATATGAAGCTTTTACTATTTGTTGCTAAAAATTGGGGATCGATGTTCCGCGGCTCCAACATGGAGAACGTTCCATTGTTAAAGTATGTGAGTTCTGATGGGAGTTTGTCCCATTGCAGTGTTTATGATTGCACTAAAGGTGTCAAGCGATTGGTTCGAGCTGATCCTAACCAGTCCTGTTCTTGCTCTTGGCTGATTAGTTGGAACAAGGAATTTGCATGTGCAGCCAACAAATTTTTTATGCCAGAAATAACCCAGAAAGAGATGTTGAAATTTCCCCATCTGCTTACTTTGTTGGGGTGGCTACAAAATCACGTTAATGTTACAACCCTGAATGTACACTCTTTTGCACTTGCCCTTTCTGGCTCTATAGAAAATAACTCCAAGCTTGTCATTACATATGCTCATTTCTTATATCACTCATTCTCTAAGAGGTACATATCAGGCCGGGATTTTGATACATTGTGTAGGTGTATGCCACTTGTGGACAGCTATGGCTGTGTTAATAAGTCGAGAAAAGGGGTTCTTGTGCCTGCCAGTGCAAGCAAATGGGCAAACTTGATCGTTTCTAATCCGTGGAGGAAAGAAAATTATATTGAGCTGGGAAAGGAGTATTTGCATCCGTCTTGTTATGCAGGCCAAACTACTAAGTCTAAGAAGCTCATCAAATTCCTGAGTGATCATCTTGGTGCTTCTGATATACCAGATATACGTCCTCCAAATGCTGGTTTTCCTGCTGTAGATACACCACTCACCAAAGACAATGCTTTTTTGCTTTTGGGTTGGATTCAGAAACTGAAGTATACGGGAGTGAGTATACCAGATAAATTCTTGAAATGTATAAAGGAGGGAAGTTGGCTTAAGGTTACAGTTAATGGGTGGATGCCGCCTTGTAAGTCTTTCTTAATTGGCTCATCGTTGGGAAAGATTTTGCAAAGTGGTTCCGTTCTTGTTGACATTCCACTCGTTGATGAGAACTACTATGGGACTAGAATACATGAGTATGAGAAGGAGTTGAAAACTATTGGAGTGATGTTCAGTTATGAGGAAGCATGTGAATTCATTGCAAGACAATTAATGCAACGAGCTGCATCTTTCAATTTAAGCAGAAGTCATGTTATTTTGATGCTTAAATTCATTCAACATCAGAGGCAAAGTTGTCTTCCTGTAGACAACTTTGTCAACAGCATCAGAAATGGAAGTTGGTTGAAGACATCTCATGGTCTCAGGTCTCCTGTAGGATCTGTATTGTATGATTCGGAATGGGAAGTTGCATCTCGAATTAGTGCTATCCCTTTTATTGATCGGGATTATTTTGGTGAGGAAATAAATAATTTCAAAGAGGAGCTCAAGTTGTTGGGTGTGATAGTTGGCTTCAGTAAAAACTATAATGTTGTTATTGACCATTTAAAATCTCCCTCTAATTTTGCCAATTTGAAAGCTGATGTTGTTATGTTGTTATTGGAATGCATTAAGTTTTCTTCTGGATCTGATAAACTCCTGAATTCACTCAAAGGTTCTTGCTGCTTAAAAACAAACTTGGGTTTCAAAACACCAGGTGAATGTTTCTTGTCTGATCCTGTATGGGGCTGCATTTTGGAGCTATTCAATTGTCTTGCTGCGATAGACCATAAATTCTATGGAGAGAAGATTTTCACTTACAAAGGTGAATTGAAGCAAATAGGGGCGGTAGTTGACTTTGAGGAAGCTATCAAAAAATTTGGTCAACTCTTCAAACAGAAAGCATCACAAACTTCCTTTAACCAACATGTTAAATCATTTCTTTCATGCTGCAGACTGCTGAAGGGAAGTGGATATAGATTTCCTGCTGATTTCTTAGTGACGGTTCATAAAGAGAAATGGTTACATACCAGGGTTGGTGATTATCGTAGTCCAAGAGATTGCATTCTTGATGGTGTGGAATGGAAATCCATCTCTTCCATAACTTGTCTTCCTTTCATTGATGACAGTGACAACTGTTATGGTAAAGGAATTTATGAGTACAAGGAGGAGCTGAAGAGCATTGGTGCTGTTACTAAATTCAAAGATGGGGTGAAGTTTGTTCCTAAATGTTTGAATTTTCCTTCAGATCCCTCCATCATTATTCCTGAAAGTGTGTTTTCTTTTCTGGAATGTATTCGTCTTCTATTAAAAGGGGGTGATGTTTCCATTGAAGGTGACTTCAGAAAAATAATGTCTGGAAATTGGTTGAAGACACATGCTGGTTATAGGCCTCCAGAGAAGTGTTTGTTGTTTGATTCCAAGTGGAATTCATTCCTGAAGCCAACAGAAGGGCCTTTCATTGATGAGAATTTTTATGGTCCCAAAATTGCATCTTACAAGAGAGAACTGGATGCAATAGGAGTCATTGTTGACATTGAGAAAGGTTGCTGCTTGGTTGCTAGTCACCTCGACTCTCTCTCTGAATATAATACTATTGTGCAGATATATAGGTACCTGAGTGAACACAACTGGAAACCCACGGATAAAGCTGCCAGAAAGATTTGGATTCCAAAAATTGCAAAGTGGGTGTATCCTGAAGATTGTGTCATACATGACCAGGATAATCTTTTTGGTTCAGAATTTTATGTTCTGGGAGATATCTATGATAAGAAGATTCTTCCATTTTTCTCCTTTGCCATGGAAGTCAGGAACAAGCCCTCACTTGATAATTATGTCGACCTTTGGAATGATTGGGAGAGTTCTGTGGAACAGTTGTCATATGACAAGTGCTCTAAGTTCTGGATGTTTATGTTGAAACATTTGAGCACTAATTCTGAGAAGAAACTTTGTGATAACTTGGTGAAACTACCTGCAACATCACGTAACAATGAGATATTTTTGTTAGATAAGAATGATGTTTTTATTCCTGACAGCCTTCATTTGAAGAAGCTTTTTGAGCTAGAGAAGGTATTTGTTTGGTATCCTCTGAACCTTGCGCCATCATCCAAGTGTAATTTGTTTGACTTATACAGAAAAATTGGTGCTCGAAATATTTCTGAAGCTATATGCACGGAGGAGCCATCTTTGCTCAGTGGTATCTCACTCAAGAAGGTTGATTTTGGAAATATATGTGATGTGAAGGTGTTGGTTAAGCTCATTCTTGGATTTCTTGCTTGTTCTAGCTTGAAAATGGAACCAAACAAGAGGATTGAAGCTGTTAAAGGTCTACTGAACTTGAGTTTCTTTGAGACAACAGATGCAGTCAGTGTGAGTTATAGTTTGTCCCTATCATCAGGAGACATCATTACCAAGAAGGCCAACAAAATGGTAAGGTGGGAAAAGCAATGTTCCAAGTTTTTCACCCAAATGAACTGGGAAAGTGGTCATTCAAGTTTAATAAAATATGCTACATATTTCTCAGAAGCCATATCAGAGGGTATTTTGTGTGAGAATCATGATCATGTTCCTGCACTCTCTCAGCTCATCACGTTGGCCTTTGTGCTGAAATTCAACAATGAGGCAATTGATTTCCTCATGGAGTCCAAGAATTATCAGATTTTCTGTGAGGATGACGAGTTCCTTAGTTCTGCATTTCCATTTTACTAA 5094 0.3924 MGSPKEHIEEIRRNKFSIGKEPNPLIEDLHQAVKNLSVELYTKDVHFLMELIQNAEDNVYSKGVKPSLEFIITSKDITSTGAAATLLIFNNEKGFSAKNIESICSVGRSTKKGKRSSGYIGEKGIGFKSVFLVTTEPYIFSNGYQIRFNEKPCPHCGLGYVVPEWVEEKATLEDIKNIYGARDGSIPTTTIVLPLKSDKVKPVKQQLSDIHPELLLFLSKIRHLSVRENNENPKLNSANAISISTEINFVTRKNMNAESYTLHLSAEENGGSEKECSYYMWKQKFPVMLENVVERRMGVEECVVTLAFPNQERLHRGKTSPGVYAYLPTEMVTNFPFIIQADFVLASSRETILLDDKWNHGILECVPSAFVDAFKTLIIGSNQAPVSTLAEMFKFIPIETSPYQKLNNVREKIKEKLVEENIIPIETYKVQKYFYKPREVGRLDSEFWDILDKARAEGVYLHNLSSHGWKILSSSLDMSKYDGILNFLGVQQVKLDWYAKCIQSSNLVGGVSEEAYMKLLLFVAKNWGSMFRGSNMENVPLLKYVSSDGSLSHCSVYDCTKGVKRLVRADPNQSCSCSWLISWNKEFACAANKFFMPEITQKEMLKFPHLLTLLGWLQNHVNVTTLNVHSFALALSGSIENNSKLVITYAHFLYHSFSKRYISGRDFDTLCRCMPLVDSYGCVNKSRKGVLVPASASKWANLIVSNPWRKENYIELGKEYLHPSCYAGQTTKSKKLIKFLSDHLGASDIPDIRPPNAGFPAVDTPLTKDNAFLLLGWIQKLKYTGVSIPDKFLKCIKEGSWLKVTVNGWMPPCKSFLIGSSLGKILQSGSVLVDIPLVDENYYGTRIHEYEKELKTIGVMFSYEEACEFIARQLMQRAASFNLSRSHVILMLKFIQHQRQSCLPVDNFVNSIRNGSWLKTSHGLRSPVGSVLYDSEWEVASRISAIPFIDRDYFGEEINNFKEELKLLGVIVGFSKNYNVVIDHLKSPSNFANLKADVVMLLLECIKFSSGSDKLLNSLKGSCCLKTNLGFKTPGECFLSDPVWGCILELFNCLAAIDHKFYGEKIFTYKGELKQIGAVVDFEEAIKKFGQLFKQKASQTSFNQHVKSFLSCCRLLKGSGYRFPADFLVTVHKEKWLHTRVGDYRSPRDCILDGVEWKSISSITCLPFIDDSDNCYGKGIYEYKEELKSIGAVTKFKDGVKFVPKCLNFPSDPSIIIPESVFSFLECIRLLLKGGDVSIEGDFRKIMSGNWLKTHAGYRPPEKCLLFDSKWNSFLKPTEGPFIDENFYGPKIASYKRELDAIGVIVDIEKGCCLVASHLDSLSEYNTIVQIYRYLSEHNWKPTDKAARKIWIPKIAKWVYPEDCVIHDQDNLFGSEFYVLGDIYDKKILPFFSFAMEVRNKPSLDNYVDLWNDWESSVEQLSYDKCSKFWMFMLKHLSTNSEKKLCDNLVKLPATSRNNEIFLLDKNDVFIPDSLHLKKLFELEKVFVWYPLNLAPSSKCNLFDLYRKIGARNISEAICTEEPSLLSGISLKKVDFGNICDVKVLVKLILGFLACSSLKMEPNKRIEAVKGLLNLSFFETTDAVSVSYSLSLSSGDIITKKANKMVRWEKQCSKFFTQMNWESGHSSLIKYATYFSEAISEGILCENHDHVPALSQLITLAFVLKFNNEAIDFLMESKNYQIFCEDDEFLSSAFPFY 1697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01351 1697 PANTHER WU:FJ29H11 5 1694 - -
Cca01g01351 1697 Coils Coil 38 58 - -
Cca01g01351 1697 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 30 215 IPR036890 -
Cca01g01351 1697 Gene3D - 26 213 IPR036890 -
Cca01g01351 1697 PANTHER ATP/DNA BINDING PROTEIN-RELATED 5 1694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01351 Cca-Chr1 26026597 26033003 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01351 - - gmx:100800765 2575.04