Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01339 ATGAGTGGGATTCCCGAAGAGCCCGTTTCTCTTGATCTGCTGAAGAAGAAAATGAGTGACTTTGCAAAGGAGAGGGATTGGGAACAGTTTCACAGCCCAAGGAACCTCCTTTTGGCAATGGTGGGTGAAGTGGGAGAGTTGTCTGAGATATTTCAGTGGAAAGGTGAGGTTCCAAAGGGACTTCCAGATTGGAAAGAAGAGGAAAAGATTCATCTTGGTGAAGAGCTTTCAGATGTGTTGCTTTACCTTGTCAGGCTCTCTGACATGTGTGGTGTTGATCTTGGCAAAGCTGCTCTAAGAAAGGTTCAACTCAATGCTATCAAATACCCCACAAAAGTTTCTCAAGACCCTTCAACCAGCAACTCAACACCAATTCATAATGCAACTCAAGATGCTTGA 399 0.4436 MSGIPEEPVSLDLLKKKMSDFAKERDWEQFHSPRNLLLAMVGEVGELSEIFQWKGEVPKGLPDWKEEEKIHLGEELSDVLLYLVRLSDMCGVDLGKAALRKVQLNAIKYPTKVSQDPSTSNSTPIHNATQDA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01339 132 SUPERFAMILY all-alpha NTP pyrophosphatases 10 113 - -
Cca01g01339 132 Pfam MazG nucleotide pyrophosphohydrolase domain 32 100 IPR004518 -
Cca01g01339 132 PIRSF UCP029826_pph 3 123 IPR025984 GO:0009143|GO:0047429
Cca01g01339 132 Gene3D - 4 105 - -
Cca01g01339 132 PANTHER - 6 122 - -
Cca01g01339 132 PANTHER OS04G0346800 PROTEIN 6 122 - -
Cca01g01339 132 MobiDBLite consensus disorder prediction 112 132 - -
Cca01g01339 132 CDD NTP-PPase_RS21-C6_like 15 105 IPR025984 GO:0009143|GO:0047429
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01339 Cca-Chr1 25333865 25336288 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01339 K16904 - pvy:116121545 212.616