Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01291 ATGGCGGATTTGCCGGAAGATCGCCGGAACTATTCTTCCAGTTCGAGGGATCCCGGAAACGGCAAGGACATGGAGGAGGATAGTGCTTGCACTGTTGCCAATGGTACAAGTAGCTCTTCGGCTTCAGGCATTCCTAGCAAGGGGTTGTCTAAAGTGACCACATTGCCTACTGACATATTACATGGAGATAAATCGGAGCCAAGTTCAAGTAAGTTTAAGATGGAAAGGTCAAAAACAGAGAGGCAGAGACACCTAAGTCCTGAAGATGCAGCACAAATTTTTGATGACAAAATTCCTATCCAGGAGAAGCTTAAATTGTTGAACAGAATAGCTACTGTAAAAGATGATGGCACTGTAGAATTTGAAGTTCCTGTGGATGTTGAACCTGAGGCTCTTGTTGCTCGATCCAAACAAGTAAACCATGTCATTGATGATTCACTTGATGCAACAGACTTTCATTACATCCCACCATTGAATATAGTTATGCTTATTGTTGGTACACGAGGAGATGTGCAACCATTTATTGCAATAGGAAAACGCTTGCAGGACTATGGCCATCGAGTTAGATTAGCAACCCATTCAAATTTTAAGGAGTTTGTTATGACAGCTGGGTTGGAGTTTTATCCATTAGGCGGTGATCCAAAAGTTCTTGCTGGTTATATGGTTAAAAATAAGGGCTTTCTGCCGTCGGGACCTTCTGAGATACCAGTTCAGCGAAATCAAATGAAAGAAATTATTAACTCTCTGCTTCCAGCTTGTAAAGAACCTGATATCGATTCCGGTGTCCCTTTCAAAGCAGATGCAATCATAGCCAATCCCCCTGCATATGGGCATACCCATGTGGCAGAGGCTCTCAAAATTCCAATTCATATTTTTTTCACAATGCCATGGACGCCAACTACCGAGTTTCCGCATCCTCTGTCACGTGTAAAGCAACAGGCTGGTTATAGGCTTTCATATCAAATAGTTGACTCTATGATTTGGCTTGGAATACGAGACATGATTAATGATCTTAGGAAGAAAAAGTTGAAGCTAAGACCAGTCACTTATTTAAGTGGGTCCCAAGGCTCTGAATCTGATGTTCCACATGCATATATATGGAGTCCTCATCTTGTTCCTAAACCAAAAGATTGGGGACCAAAAATTGATGTAGTGGGGTTTTGCTTTCTTGATCTTGCGTCAAACTATGATCCTCCGGAGCCCCTTGTAAAATGGATTGAAGATGGTGACAAGCCTATTTACATTGGATTTGGTAGCCTGCCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCATTAGAGATCACTGGACAGAGGGGCATCATAAATAAAGGATGGGGAGGTCTTGGGAATTTGGCAGAACCAAAGGACTCTATATACTTATTGGATAATTGCCCTCATGATTGGCTTTTCTTACGTTGCAAGGCAGTG 1440 0.4194 MADLPEDRRNYSSSSRDPGNGKDMEEDSACTVANGTSSSSASGIPSKGLSKVTTLPTDILHGDKSEPSSSKFKMERSKTERQRHLSPEDAAQIFDDKIPIQEKLKLLNRIATVKDDGTVEFEVPVDVEPEALVARSKQVNHVIDDSLDATDFHYIPPLNIVMLIVGTRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVMTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPVQRNQMKEIINSLLPACKEPDIDSGVPFKADAIIANPPAYGHTHVAEALKIPIHIFFTMPWTPTTEFPHPLSRVKQQAGYRLSYQIVDSMIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSESDVPHAYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNYDPPEPLVKWIEDGDKPIYIGFGSLPVQEPKKMTQIIVDALEITGQRGIINKGWGGLGNLAEPKDSIYLLDNCPHDWLFLRCKAV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01291 480 MobiDBLite consensus disorder prediction 1 24 - -
Cca01g01291 480 MobiDBLite consensus disorder prediction 64 90 - -
Cca01g01291 480 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 25 480 - -
Cca01g01291 480 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80A2-LIKE ISOFORM X1 25 480 - -
Cca01g01291 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 159 480 - -
Cca01g01291 480 MobiDBLite consensus disorder prediction 1 90 - -
Cca01g01291 480 CDD GT1_Gtf-like 158 480 IPR002213 GO:0008194
Cca01g01291 480 Pfam Glycosyltransferase family 28 N-terminal domain 160 303 IPR004276 GO:0005975|GO:0016758|GO:0030259
Cca01g01291 480 Gene3D Glycogen Phosphorylase B; 389 480 - -
Cca01g01291 480 Gene3D Glycogen Phosphorylase B; 160 388 - -
Cca01g01291 480 MobiDBLite consensus disorder prediction 30 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01291 Cca-Chr1 23312572 23344306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01291 73 480 Glycosyltransferase AT3G07020 80.630 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01291 K05841 - gmx:100812490 897.501