Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01270 ATGCCACAGCCACAGCCACAGCAGCAGTATCAACATCCTGGAAGGCAACATCCTAACCAACGCCATAATGTACATTCTCAACAGCAGGCAAAACTTCTGAAGGGAATGGGAAGAGGAAATATATTGGTCCATCAAAATCTATCTGTGGATACTTCTCATCTAAGTGGACTCTCTCTACCTGCAGGAAGCCAAACTGGTGAAAAAGGGGACCAAATCATGCACATGATGCAAGGTCAAAATTTATATCCCGGATCTGGTTTAAACCCAAATCAACCTCCAAAGCCTTTGGGTCATGCTCATTCTTCAAATCATTCACAGTTGCAGCAGAAGCTACATTCTGGGTCACCCACCACTTCATCAAAGCAACTTCACATTCCTTCTGATACTGCCCAAGGACAGGTTTCACCAATTTCATCGGGTCAGTTGTTGCCACCCCCACAGCCAGGTGTTATTTCTTCTAACCACCATCAGCTGCAGCCACAGACTCAGTCTAAGAAAATTAATCAAACTTCAACAAATGTTGAGAGAAAATTGCCTCAGAACCATCTTGTGCATTCTGAGTCATCAAGCAAGTCTCAGTCTGATCTAACTCAAGCTGATCAACAGCCTACAAACAGTGGTTCCCAGGTTAATGCATCTGCTACAATGACTCAGGACTGTATGGATTCTGTTAGTGTGGTACCAGGTGTTACTACTGTTTCTTCTCAGTGGAAAACATCAGAACCATCATTTGATTCCACCATGAACAAACAAACCTCTCAAGTGAGCTCCTTGGGGAGTGTACCTGTTGGAAATTTCACTGGAAATGAGCAACCAGCAATTAGTCCAGGGTTGGGGCCAAGATCAGTTGGCTTGACTGCTCATGCACATAATTCTGATACTCAGTGGCAGCAACGTCAGACTCAACCTCTCAAACAGTTACCACAACCCATCCTATCTCAGCAGACATATCATTCTGAGCAGCAGCAACAGGAGCAAGAACAACATTCTCCCAAAGATCTTGCTTTACAACATCAATCTCAGCAACATATGCAACATCTACAATCAGGGCAGAGATTGGAGTCTCTATGCCTTTATGACAGCAGTGTACAGATGAAGCTGGTTATTCGTGGGGACTGGGGAATATGGAAACAGATATTCGTTGTTTCTGCACAGGTCCTGTTGAAGTACTAA 1173 0.4416 MPQPQPQQQYQHPGRQHPNQRHNVHSQQQAKLLKGMGRGNILVHQNLSVDTSHLSGLSLPAGSQTGEKGDQIMHMMQGQNLYPGSGLNPNQPPKPLGHAHSSNHSQLQQKLHSGSPTTSSKQLHIPSDTAQGQVSPISSGQLLPPPQPGVISSNHHQLQPQTQSKKINQTSTNVERKLPQNHLVHSESSSKSQSDLTQADQQPTNSGSQVNASATMTQDCMDSVSVVPGVTTVSSQWKTSEPSFDSTMNKQTSQVSSLGSVPVGNFTGNEQPAISPGLGPRSVGLTAHAHNSDTQWQQRQTQPLKQLPQPILSQQTYHSEQQQQEQEQHSPKDLALQHQSQQHMQHLQSGQRLESLCLYDSSVQMKLVIRGDWGIWKQIFVVSAQVLLKY 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01270 390 MobiDBLite consensus disorder prediction 181 213 - -
Cca01g01270 390 MobiDBLite consensus disorder prediction 8 30 - -
Cca01g01270 390 MobiDBLite consensus disorder prediction 1 31 - -
Cca01g01270 390 MobiDBLite consensus disorder prediction 237 345 - -
Cca01g01270 390 MobiDBLite consensus disorder prediction 287 345 - -
Cca01g01270 390 MobiDBLite consensus disorder prediction 78 169 - -
Cca01g01270 390 PANTHER CHROMATIN MODIFICATION-RELATED PROTEIN EAF1 A-RELATED 6 351 IPR044798 GO:0035267
Cca01g01270 390 MobiDBLite consensus disorder prediction 95 169 - -
Cca01g01270 390 MobiDBLite consensus disorder prediction 237 272 - -
Cca01g01270 390 PANTHER CHROMATIN MODIFICATION-RELATED PROTEIN EAF1 A-RELATED 6 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01270 Cca-Chr1 22529698 22533066 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01270 - - gmx:100811365 528.094