Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01257 ATGATCCAAATCACCCACTGCCATAGCAGCATGGGAACATGCTTGCCTGAGAAACATGCTGCACTATTCATATTTGGAGATTCTTTATTTGACAACGGAAACAACAACTACATCAACACCACCACCTCGTACCAGGCCAACTATCCTCCCTATGGACAAACTTTCTTCAAATACCCTTCTGGCAGGTTTTCTGACGGTCGCATGATACCAGATTTTGTTGCTGAGTTTGCTAAGTTGCCTCTACTTCCACCGTACCTGCATCCGATTCATGAATATATGTATGGTGTCAATTTTGCTTCAGGAGGTGCCGGTGCTCTGCGTGAAACCTCTCAGGGAATGGTAATAGACCTCAAAACTCAAGTGAGTTATTTAAGAAATGTAAACAAATTATTTAGTCAGAGACTGGGACAAGCAAAAGCCGAGGAAATGCTGTCAAAATCTGTACACTTGTTTAGCATTGGATCCAATGACTACGGTACTCTTCTGGATCCAAATTCGACTGTGCTTCTTCCGGTCAATCATCAAGAATTTGTAGATATTGTAATTGGAAACCTCACAGACGTGATCAAAGAAATTTATAACCTTGGTGGGAGGAAATTTGGATTCTTTAATGTGGGTCCAATAGGTTGTTCCCCTGCCATAAGGAATTGGGTGAATAATGGAAGCACAGAGAAACATCTGAAGGGATTCAAATATTCAGTGACTGATTTCTATAGTGCAGTTTCTCAAGTGCTGAACAACCCTACGGAATATGGGTTCAAAGAAGCGAGCGTTGCATGTTGTGGAGGTGGGGCATATAGAGGAGATGATAGTTGTGGAGGGAACAAAGGGATAAAAGAATACGAGTTGTGTGACAATGTGGATCAACATTTGTTTTTCGACTCTCATCATCCCACTGATCGAGCTAGTCAGCATTTTGCCGAGTTGATATGGAATGGAAATCGCACTGTCACAAGTCCTTACAATCTAAAACAACTATTTGAAGTTTGA 990 0.4162 MIQITHCHSSMGTCLPEKHAALFIFGDSLFDNGNNNYINTTTSYQANYPPYGQTFFKYPSGRFSDGRMIPDFVAEFAKLPLLPPYLHPIHEYMYGVNFASGGAGALRETSQGMVIDLKTQVSYLRNVNKLFSQRLGQAKAEEMLSKSVHLFSIGSNDYGTLLDPNSTVLLPVNHQEFVDIVIGNLTDVIKEIYNLGGRKFGFFNVGPIGCSPAIRNWVNNGSTEKHLKGFKYSVTDFYSAVSQVLNNPTEYGFKEASVACCGGGAYRGDDSCGGNKGIKEYELCDNVDQHLFFDSHHPTDRASQHFAELIWNGNRTVTSPYNLKQLFEV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01257 329 Pfam GDSL-like Lipase/Acylhydrolase 22 310 IPR001087 GO:0016788
Cca01g01257 329 Gene3D SGNH hydrolase 14 316 IPR036514 -
Cca01g01257 329 PANTHER F15I1.5-RELATED 5 328 - -
Cca01g01257 329 SUPERFAMILY SGNH hydrolase 22 313 - -
Cca01g01257 329 CDD SGNH_plant_lipase_like 21 314 IPR035669 -
Cca01g01257 329 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 328 IPR044552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01257 Cca-Chr1 21874407 21885796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01257 21 327 Acyl Lipid Metabolism Gene Families AT4G10950 29.825 1.25e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01257 - - gmx:100808852 556.599