Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00466 ATGGAGGCAACAACAGATTCCCTAGAATTCCCAATCGAATTGCAATCCAAAGTGTTCCAAGTGCTAAGCTCGAACGACAACACTGCAATGGAAACGCTATTCTCTCACCTCTACTCTCCGCAGCACCAGCACAGATCCCAAGCACTCGCGTTCCTCCAATGCTGCAAGCGCCACCACCCGGATCTCCTCTTCATCAAACTCTTCTTCCTCCTCCGATGCACTCCCCTCCCGGAGACACGCGCCAACGCCGCACGCGCCCTCCTCCTCCTCAATCCCGCAGACTTCTGGCCCAACCTCAAGCCCATCGCCCAGGCCCGCCTCAAGGCCCACTTCCTCACCTTCCTCGCCCTAGAGCCTTCCATCCACGTCCTCCGCCTCGCCTCTCTCCTTCTCGCCGAAACCCTCGCCGCCACCTACAAATCGCATCAAACGTGGCCTGAGATGCTCGACTTCTTACTCTCCTCCCTCGCCTCAAACGACGACAAGCTCCGCGAGGTCGCCGCATTGGTCCTCGCCAAGCTCCCAAACGACTCCCGTTTCCTCGTCTCCAACGCGTTCAGGGAGAAACGCAGCGCCCTGCGTCCTCTCCACGCCGCGTTTCTCGCCGCCCTCGCCTCCTCCAATCCGGACGTCCAGGTCGCCTCATTCGCGGCCGTCGTTGGCCACATCCGCCTCTTCTCCGACCCGGCGCTCTTCCACGAGCTCCTCCGCGCGGTCATGGTCGGCGTCTTCGCGCTCCTGCATGTCTTCGAAGCCACCTATTTCCGAAGCGCGTTCGCGGAGCTGGTGAACCTTGTGTACCGTGAGCCTCTGCTTCTGAAGCCGTACATGAACGATATGGTCCTGGACGTGCTGCAGATCGCCGAGAGCGGTGGTCTGAGCAAGGAAACGCACCGTTTAGCGTTTGAGCTGGTGGTGGCCATGACTGAGGTGAAGGAGTATGAGCACGTGTTTGTCAACCTTCCAAACTCCACTGCCCGGAGGCTGTTATGTGTTCCGATGAAGATGCTGCTGTGTGTCGGAGAGAACggtagtggtggtggtggtggtgACAGTGTATCGGAAGGAGAGAAGGTTGTTGACGTTTATGGATTCGGGATGAAGTGGTTGAAGAAGCTTTGTGTTGCACTCGGAGCGAATAAAGCGGTGCCTGCTGCGTATGAAGTGTTGCGGCTTCACTTAGACAATGCCCAATGGAATATGCGCCATGCAGGAATCACAATGCTCAGTATCCTGGCTGAAGAATTCTCCGATGAACTGGTATTGATGGACAATTTTCTAGGTGAAGTGGTGACCAAAGTTTTGAAGTCAATCCAAGACTCACATATTCAAGTTCGGTTAGCAACTTTCAAATTTATGGAGACTCCTACTAACTTTGTTCAGGCGGTGCATATCCTTTACCATCATAAACTCGTGCATGCTTTTTGCATGGCGCTCGACAATGATCAAGACCATAAAGTGAAGGAACAAGCTGTCTCAGCAATGCTATTCTTTCTAAAGAACACCTTGCCAGAAAGCTTAACACTGAACAAGAATGGGGATATTTTAATGAGCAAATTGTTGCCATTGCTTCAGGGTAAAGAAAGTGCTAAGCAAAGAAGTATTGCTTTGTCAATTTTAAACATAGTTGCTCAACGGTGTCATGAAGTGGCTCACAAGTACTGTGCAACCTTTCTTCCCATCTTATTGGAAGCATGCAATGATGAGAATTCTGAAATCAATGAGGAGGCAGCACGGGGAATTCGAATTTTTGCAGAGCTTGGAACACCGCAGTTGAAGCCTTTTGTCAATAGGATATTGTTAGAACTCGGTGTTTTGATGAACCATCCGAATCGATCACTTTCAGAGAATGCAAAAGCTCATGATATTGCAGTTTCTGCTCTAGGAAGAATTTGTGAAGTCCATCGTGAATGCATTGATGGTTCTAAGATTGTTCCAGCCTGGCTAAGTTTCTTGCCACTTGAAAATGATTTGATCGAAGCCAAAGTTATGCATGAACAACTCTGTTTAATGGTTTCAAGATTAGATAAGGATCTTTTAGGATCTGGTAATCAAAACCTTGTCAAGATTATTGTAGTGTTTCTTGAGATTATAGACAAGGGTGACAAATTAGCTACAGCAGAAACAATGGAGCAGGTGAATTATTTGCTGAGGCTGCTTGTGCAGCACATTCCACGTAGTGTGCTTGACACGATTTTATTATCTCTGAATGCTCAGCAACGGGAATTACTATTGACTTTGGTATCCTCCTAG 2253 0.4905 MEATTDSLEFPIELQSKVFQVLSSNDNTAMETLFSHLYSPQHQHRSQALAFLQCCKRHHPDLLFIKLFFLLRCTPLPETRANAARALLLLNPADFWPNLKPIAQARLKAHFLTFLALEPSIHVLRLASLLLAETLAATYKSHQTWPEMLDFLLSSLASNDDKLREVAALVLAKLPNDSRFLVSNAFREKRSALRPLHAAFLAALASSNPDVQVASFAAVVGHIRLFSDPALFHELLRAVMVGVFALLHVFEATYFRSAFAELVNLVYREPLLLKPYMNDMVLDVLQIAESGGLSKETHRLAFELVVAMTEVKEYEHVFVNLPNSTARRLLCVPMKMLLCVGENGSGGGGGDSVSEGEKVVDVYGFGMKWLKKLCVALGANKAVPAAYEVLRLHLDNAQWNMRHAGITMLSILAEEFSDELVLMDNFLGEVVTKVLKSIQDSHIQVRLATFKFMETPTNFVQAVHILYHHKLVHAFCMALDNDQDHKVKEQAVSAMLFFLKNTLPESLTLNKNGDILMSKLLPLLQGKESAKQRSIALSILNIVAQRCHEVAHKYCATFLPILLEACNDENSEINEEAARGIRIFAELGTPQLKPFVNRILLELGVLMNHPNRSLSENAKAHDIAVSALGRICEVHRECIDGSKIVPAWLSFLPLENDLIEAKVMHEQLCLMVSRLDKDLLGSGNQNLVKIIVVFLEIIDKGDKLATAETMEQVNYLLRLLVQHIPRSVLDTILLSLNAQQRELLLTLVSS 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00466 750 PANTHER BETA-3, PUTATIVE-RELATED 20 747 - -
Cca01g00466 750 PANTHER IMPORTIN BETA 20 747 IPR040122 GO:0006606
Cca01g00466 750 Gene3D - 20 529 IPR011989 -
Cca01g00466 750 Gene3D - 530 749 IPR011989 -
Cca01g00466 750 SUPERFAMILY ARM repeat 26 724 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00466 Cca-Chr1 5835197 5841877 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00466 K20222 - gmx:102669706 1006.13