Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00460 ATGGAATTGGACATTGGAGTCACTCACTCAGATCTGACTCTTGATGCTATTGCAGGTTGGGGTATTTGGTGCAATCAACACAATTTACCATCCTACTCTCAAGATCAAAAGGTTAACTATAAAAGCCAGTATTTGGTTGATCAGGAAGATTTATTTCCAACAGCTCAAATCCTTCATGGCCACAAAAATTTCAGCGCTAGGAGCCTATCAGCATCACAAAATAATGATACACATGCAGCTGCAGCCAAGCAAGATTCTTCCCAAAGGAGCTATTCATCTAGAGAGTCAGATGAAAGGGGTCATTGGAAGAAAATAGCTTATCCATTTGAGTTGGTGAAGCCTGGAGGAGTTGAAGGGGAAACAACCCTAAAAGATATAAATCACCAGATGCTGATGAGCCCAACAAAGCCAATTCCACACCCTGTGGGAGACCCTCTTACTCATTCATGCATTTCAACTCGTGGTTTTGGAATTTCAGGTAAAGCAGTGGCAGTTACTAGGATTCACACCCAGGGTAGAGGCTCCATTACCATTATAAGGACCAAGGGTTGA 552 0.4257 MELDIGVTHSDLTLDAIAGWGIWCNQHNLPSYSQDQKVNYKSQYLVDQEDLFPTAQILHGHKNFSARSLSASQNNDTHAAAAKQDSSQRSYSSRESDERGHWKKIAYPFELVKPGGVEGETTLKDINHQMLMSPTKPIPHPVGDPLTHSCISTRGFGISGKAVAVTRIHTQGRGSITIIRTKG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00460 183 MobiDBLite consensus disorder prediction 68 89 - -
Cca01g00460 183 MobiDBLite consensus disorder prediction 68 99 - -
Cca01g00460 183 PANTHER - 1 183 - -
Cca01g00460 183 PANTHER PROTEIN XRI1 1 183 IPR039933 GO:0007140|GO:0007143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00460 Cca-Chr1 5720238 5721900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00460 - - gmx:100797065 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00460 01 5720238 5721900 Cca01g00460 01 5720238 5721900 ECH