Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00443 ATGTCACCCAAGCTATTCTCTTTAAACTTTCTCCTTGAGAGAAAGAGGCCTCAAGAAACCACAGATGAATTGGCTATTGTGAAAGCAGCTGCACGGGCATGGTATCAACATGGTTCAGGCTCTGAAGGTAAGGCTAAGAGTGAGTATGATGTCACAAGAACTCAACGTGTAGCCAGGCCTTCACGTTACAAGTTAGAAGCTATGAGAATGGCCAAGGAAAAAGCACCTTCAATTCACACCAATAAACCTCTTCTTGACACATATGAAGTTCAATGCATTTCAAGGCAATTGAATAGGCTTATAGTATCTGGCCACAACAAACTTAGTAACAGCAACAACTCTACAAATAATAATGATGGTAATAGAAGGATGAAGAATGAGAAGAGGATCAGAAAAGGGTATTTTCCAAGACATGCTGTTGAATGCAGGGGAGGGGATGAAGAGGTTGGTGGCACTGCTTTGTCAGCCAAATGTGTACCAGTAGTTAATCTGGCAAAGTGTTTGCCAAGGGTCAATCATTCTTTGTGA 528 0.4167 MSPKLFSLNFLLERKRPQETTDELAIVKAAARAWYQHGSGSEGKAKSEYDVTRTQRVARPSRYKLEAMRMAKEKAPSIHTNKPLLDTYEVQCISRQLNRLIVSGHNKLSNSNNSTNNNDGNRRMKNEKRIRKGYFPRHAVECRGGDEEVGGTALSAKCVPVVNLAKCLPRVNHSL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00443 175 MobiDBLite consensus disorder prediction 105 127 - -
Cca01g00443 175 MobiDBLite consensus disorder prediction 105 120 - -
Cca01g00443 175 PANTHER - 2 147 - -
Cca01g00443 175 PANTHER - 2 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00443 Cca-Chr1 5492300 5492980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00443 - - gmx:106797170 228.024