Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00435 ATGTCAGCTTCATGCGGGGTGGTGGAGTGCGTCCTCGTTCTGGGCTGCGCGCGCTGGCTCTGGAAGCGATGCAGCTACGTCGGAAGCTACGACAGCGCCACGTGGCCCGCCGCCACCCCCGACGAGTTCGACTCCGTCCCCCGCCTCTGCCGCCTCATCCTCGCCATCTACGAGCCCGACCTCCGCAAGCCCATCAACTACAGCCCAGCCCAAGGCCCAGAGCCCGAGTGGGTCATCAAGCGCGTCAGCCACCAGGACACGCTGGGGCAGGCGCCGCCCTACCTGGTGTACGTGGACCACCGGCACAAGGAGATCGTCCTGGGCGTCCGCGGGCTGAACCTGGCGAAGGAGAGCGACTACAAGGTGCTCCTGGACAACCGATTGGGGCAGCAGATGTTCGACGGCGGGTACGTCCATCGCGGGCTGCTGAAATCGGCAGTGTGGTTGCTGAATAGGGAATCGGAGACGCTTAAGCGGCTGTGGGTGGAGAATGGGTGCCAGTATGATATGGTGTTCGCTGGGCACTCTCTGGGTTCTGGCGTGGTCTCGCTTTTGACGATATTGGTTGTGAATCGTAGAGAAAGCTTGGGGGGCATTCCGAAGGAGAAGATTCGATGCTATGCCATTGCTCCTGCCAGGTGTATGTCACTCAATTTGGCTGTCAAGTACGCCAATGTCATTCATTCTGTTGTTTTGCAGGACGATTTCTTGCCTAGAACCCCTACACCCTTGGAAGATATTTTCAAATCTATTTTCTGCTTGCCCTGCTTATTGTTCTTGGTTTGCCTGAGAGACACCTTCATACCCGAGGGTAGAAAGCTTAGAGATCCAAGGAGACTTTATGCACCTGGACGAATGTACCATATTGTCGAGAGAAAATTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTTTTGTCCTGCAATGCAACATCGGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAAAAAGCCTTACAATTAATGAAGGAAAAGAGCTCCGAAACAGTGACAGACCCTCCAACCGTACAAAAGTTTGAGAGGTTGAAGACCATAGAGAAAGAACATAAAGATGCTTTGGAAAGAGCTGTTAGCTTGAATGTACCTCATGCAGTGGACAGTGCAGAGAAAGAAGCATCGGAGGACAATGAAGATGAGGCAACCGGTAGTGAAAGCAAAAATGTCTCAAGCACCCAATCAAATTCTAGTGGTGGAAAGTCAAATTGGGATGAGGTGGTTGAAAAACTCCTAAAGAAGAAAGAGACAGAAGATCTAAACGTGGAAAGAGATACGGATGTCACACAATGA 1350 0.5163 MSASCGVVECVLVLGCARWLWKRCSYVGSYDSATWPAATPDEFDSVPRLCRLILAIYEPDLRKPINYSPAQGPEPEWVIKRVSHQDTLGQAPPYLVYVDHRHKEIVLGVRGLNLAKESDYKVLLDNRLGQQMFDGGYVHRGLLKSAVWLLNRESETLKRLWVENGCQYDMVFAGHSLGSGVVSLLTILVVNRRESLGGIPKEKIRCYAIAPARCMSLNLAVKYANVIHSVVLQDDFLPRTPTPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREAEKALQLMKEKSSETVTDPPTVQKFERLKTIEKEHKDALERAVSLNVPHAVDSAEKEASEDNEDEATGSESKNVSSTQSNSSGGKSNWDEVVEKLLKKKETEDLNVERDTDVTQ 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00435 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Cca01g00435 449 MobiDBLite consensus disorder prediction 404 422 - -
Cca01g00435 449 SUPERFAMILY alpha/beta-Hydrolases 38 243 IPR029058 -
Cca01g00435 449 Pfam Lipase 3 N-terminal region 8 64 IPR005592 GO:0016042
Cca01g00435 449 Gene3D alpha/beta hydrolase 34 256 IPR029058 -
Cca01g00435 449 MobiDBLite consensus disorder prediction 375 424 - -
Cca01g00435 449 CDD Lipase_3 42 242 - -
Cca01g00435 449 Pfam Lipase (class 3) 108 242 IPR002921 GO:0006629
Cca01g00435 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00435 Cca-Chr1 5318782 5321370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00435 1 342 Miscellaneous Gene Families AT5G37710 74.783 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00435 - - gmx:100798831 753.051