Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00428 ATGAAGATCTTGGAGGCTAATGCTGGTGCACTCACGAATTTTGAGGTCCTTCATTTCTTACGAGCTAAAGGAGCTTCAAAGGATCCAACAAGGGTTATTGCCAAAGTAGCGCAGTCTGAATACAAGGTTTATGATTATTTGGTTAACACTGCTGCATCTGCTCAAACAAGAGAGAACATCAAAGATTTCTTGACAAGTGTTAAGCAGCATGACCTGGCAAAAGCTGAGGTTTTGAACATATTAAACACTAGGCCAGTTGCTGAAGTTGAAATATTCCCAATGATAGAGAATTGTGAGGAGCGTTTTCCAGACGAAGAGGTGAGTGAAATAGTAGAGCTGGTGAAGAAAACATTGCCACCACCTCTCATTATGAAGCAGGAAGAAACCGCAACACTGAAAAATGAACAAGGCAAAGAGATTAGCCAAGACCAAAATGAAAACGAAGGTGGAGAACAAATGGACACTAGTTAA 471 0.4076 MKILEANAGALTNFEVLHFLRAKGASKDPTRVIAKVAQSEYKVYDYLVNTAASAQTRENIKDFLTSVKQHDLAKAEVLNILNTRPVAEVEIFPMIENCEERFPDEEVSEIVELVKKTLPPPLIMKQEETATLKNEQGKEISQDQNENEGGEQMDTS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00428 156 MobiDBLite consensus disorder prediction 131 145 - -
Cca01g00428 156 SUPERFAMILY HRDC-like 4 119 IPR010997 GO:0000166|GO:0044237
Cca01g00428 156 Gene3D - 1 119 IPR038324 -
Cca01g00428 156 PANTHER CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN 1 140 IPR038846 GO:0005666|GO:0006384
Cca01g00428 156 Pfam RNA polymerase Rpb4 10 117 IPR005574 GO:0006352|GO:0030880
Cca01g00428 156 SMART rpol4neu2 1 121 IPR006590 -
Cca01g00428 156 MobiDBLite consensus disorder prediction 125 156 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00428 K25304 - gmx:100789488 239.195