Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00402 ATGCCTTCATCCACATGTGGCAGCACTGAAACTGCTCCACCACCCCCTCTCTACTTGAACAATGAGAAGAACAACTTGTCAAATAAACAAACTTCATCATCATCCTCCACTTCCCCTCTCATGAAGAACAATTCCTCCACTCAGAAGAAGTGTGCTTTTGCTAGAAAGTGCGCTAGGCTTGTCAAAGAACAAAGGGCTCGTTTCTACATCATGAGGCGTTGTGTCATTATGCTCATATGCTGGCATGAGTACAGTGAGTAG 261 0.4483 MPSSTCGSTETAPPPPLYLNNEKNNLSNKQTSSSSSTSPLMKNNSSTQKKCAFARKCARLVKEQRARFYIMRRCVIMLICWHEYSE 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00402 86 PANTHER DVL19-RELATED-RELATED 22 85 - -
Cca01g00402 86 Pfam DVL family 62 80 IPR012552 GO:0008285
Cca01g00402 86 PANTHER ROTUNDIFOLIA-LIKE PROTEIN 22 85 - -
Cca01g00402 86 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00402 Cca-Chr1 4695004 4695762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00402 - - gmx:100815379 109.768