Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00382 ATGCCCTGGGAGAGGAAGATGACTAACACTCCTATTCATGAACCTTCACTTAAAGTGTCCAGATTCTCTTTACTACCAGAAAAACTTGGTGGTGTGGTTGTACTCTTAATAAGGTTCGGCATACTTGTGTGCCTTGTTGCATCCATATCACTTGCTCTCCACTCAACGTTCTCAAAACCGGACCGGTGGTTCCCCTTACCGGAGCATATCCGCACCGTCCCAGATGCATCTGTCATTGACAGTGTATCAACAAACATCTCACATATTCTATTTGGCATTGCTGGTTCAGCAAACACTTGGCACGACCGTAGCAGCTACAGCATGCTATGGTGGAAACCAGACACCACTAGAGGTTTTGTTTGGCTTGACAAGAGGCCAAAGATTTTGCATACTGACATGTCAATGCCATATCAGATCTCTCATGGCTGGGCTCGGTTCAAGTATGTGCATTCAGCATCTGCGGTTCGGATAGCTCGGATTGTTTATGAGAGCTTTAAGCTTGGTTTGCCAAAAGTTAGGTGGTTTGTGATGGGAGATGATGATACTGTGTTTTTCACTGAGAACTTAGTTACTGTGTTGGGAAAATATGATCACAATCAGATGTATTATATTGGTGCAAGTTCTGAGAGTGTGGAGCAAAATGTGATGCATTCTTATAACATGGCATTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCTGCTCAACTAGCCAAAATAATGGATGGTTGTCTAAATAGGTACTTCTTTTTTTATGGTTCTGATCAAAGGGTTTGGGCCTGTGTGCATGAAATTGGGGTGCCTCTTACCAGAGAAGGTGGATTCCACCAGCTTGACATAAGAGGGAATCCATATGGTTTTCTAGCAGCACACCCCTTGGAACCACTTGTATCACTCCATCACCTTGACCAATTGCACCCCTTGTTTCCCAACCAGACTCGTATACATTCAATGAAAAAGCTCATGAGTGCGTACAACATTGACCCTGCCCGGATTGTGCAGCAAAGTTTCTTCTATGATCACAAGCGTAGATGGTCAATATCTATTTCATGGGGTTACACAATACAAATCTATACAACATTGTTGATAGCAGCAGACTTGCAGATGCCATTGCAGACATTTAAGACTTGGCGAAGTTGGAAGGATGGTCCCTTCACATTTAACACTAGACCTATGAGCTCTGACCCATGCCAGCAACCGGCTTTATTTTTCCTAGACAATGTTACAGATGTGGGAAGTGGAAGTGTCACCACCTACAAGAGATATGAAGGCAAGGAAGCAAAGTGCAAGAGAGAAGACATTAATCTTGTGAAAGTGCAAAAAATTAATGTTTCTGCCTTGAAGCTGGATCCAGAATATTGGAAGAATGTACCGCGTAGGCAATGCTGCAAGCTTATGGATGGTGGAAACATAAAGGATGGCAGTATGCATATCAGGATAAGGAAGTGCAGACTTCAAGAAACAATTACTATTTAG 1479 0.43 MPWERKMTNTPIHEPSLKVSRFSLLPEKLGGVVVLLIRFGILVCLVASISLALHSTFSKPDRWFPLPEHIRTVPDASVIDSVSTNISHILFGIAGSANTWHDRSSYSMLWWKPDTTRGFVWLDKRPKILHTDMSMPYQISHGWARFKYVHSASAVRIARIVYESFKLGLPKVRWFVMGDDDTVFFTENLVTVLGKYDHNQMYYIGASSESVEQNVMHSYNMAFGGGGFAISYALAAQLAKIMDGCLNRYFFFYGSDQRVWACVHEIGVPLTREGGFHQLDIRGNPYGFLAAHPLEPLVSLHHLDQLHPLFPNQTRIHSMKKLMSAYNIDPARIVQQSFFYDHKRRWSISISWGYTIQIYTTLLIAADLQMPLQTFKTWRSWKDGPFTFNTRPMSSDPCQQPALFFLDNVTDVGSGSVTTYKRYEGKEAKCKREDINLVKVQKINVSALKLDPEYWKNVPRRQCCKLMDGGNIKDGSMHIRIRKCRLQETITI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00382 492 PANTHER FRINGE-RELATED 13 490 - -
Cca01g00382 492 PANTHER BNAA05G27650D PROTEIN 13 490 - -
Cca01g00382 492 Pfam Protein of unknown function, DUF604 213 464 IPR006740 -
Cca01g00382 492 Gene3D - 78 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00382 Cca-Chr1 4422569 4427861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00382 13 490 Glycosyltransferase AT3G11420 56.740 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00382 - - gmx:100802549 834.713