Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00377 ATGCCAAAGGAGAGAAGAGATAGGTCTGTGTCACATGATAGTTGCAGAGTATCACCTTACCCAAGCAGCTCTAGTCGTGTTGGAAGATCTGCTCCTAAAGAGGCAGAGGAAAATGTTAAAGAATGGGAAGAAGCTAGGTGTCCAGTGTGCATGGAGCACCCTCACAATGCAGTTCTCCTCATATGTTCATCCCATGATAAGGGATGCCGCCCTTACATGTGTAACACTAGCTATCGCCACTCAAACTGTCTCGATCAATTCTGCAAGTCATTTACAGACACCTCGTCAACCATTCCTCAAGTAGAAGGTCAGATTTCAAACACTGTTGAAAGTAGAATTGATGTGCCAGAAGACAGAAGTGAAGGTTTGGTTACAATGCAAGCCTTATCCTGTGAGAATGATGCAAAATCGAAATTAGTATGCCCTCTATGTAGAGGGCAAATAAAAGAGTGGAAAGTAGTGGAGGCAGCTCGTCATTTCATGAATGAAAAATCGAGGAGCTGTTCATGTGAGACTTGCAACTTCAGTGGTACATACACAGATCTTAGAAAGCATGCAAGGCTTGAACATCCTCTTGAACGCCCATCTGCAGTAGATCCAGAGCGTCAGCGTAACTGGAGGAGGTTGGAGCGCCAGAGGGATCTCGGTGACCTCCTTAGCACACTGCAAACATCATTTGGGGTAGATGATCCCATTGATGATGGTGGTCTGCTGGCTGTGTTTTTCCTCATTCTTCAACCTGCATCCGTATCCAGGGGTACCACACTCCAAATGCGAATAAGAAGACCCTCAACACTCTGGGGGGAAAATTATGAAGGACAATCTGGATCTGATGATGCAAATGAATCCTCAGATGGAGGCTCTGACAGTAGACCGCGCCGTGTCCGGAGACGAATGACACCTCCGCCATGA 912 0.4649 MPKERRDRSVSHDSCRVSPYPSSSSRVGRSAPKEAEENVKEWEEARCPVCMEHPHNAVLLICSSHDKGCRPYMCNTSYRHSNCLDQFCKSFTDTSSTIPQVEGQISNTVESRIDVPEDRSEGLVTMQALSCENDAKSKLVCPLCRGQIKEWKVVEAARHFMNEKSRSCSCETCNFSGTYTDLRKHARLEHPLERPSAVDPERQRNWRRLERQRDLGDLLSTLQTSFGVDDPIDDGGLLAVFFLILQPASVSRGTTLQMRIRRPSTLWGENYEGQSGSDDANESSDGGSDSRPRRVRRRMTPPP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00377 303 PANTHER OS01G0612600 PROTEIN 1 296 - -
Cca01g00377 303 MobiDBLite consensus disorder prediction 15 29 - -
Cca01g00377 303 Pfam Protein of unknown function (DUF1644) 43 220 IPR012866 -
Cca01g00377 303 MobiDBLite consensus disorder prediction 1 38 - -
Cca01g00377 303 MobiDBLite consensus disorder prediction 268 283 - -
Cca01g00377 303 MobiDBLite consensus disorder prediction 267 303 - -
Cca01g00377 303 PANTHER OS01G0612600 PROTEIN 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00377 Cca-Chr1 4372634 4376498 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00377 - - ccaj:109788018 573.548