Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00376 ATGGCTCTTGTTCTCAACGTCTCATTGTGTTCCACTTCTAAGCCCCGTCTTTCTCTATCAACCTCCAATTCCAAAGCTTTTCCTCTTCCTCTCCTTGGACTCAACACAAAGCAAAGTCGCCAAGCATCTCAGAAACTCACATTTTCATTGGCTGAATCCGTGTCTAGTGCCACTCTCGTTGCTTTCCTCTCTGCTTCTTTCATCTTTGTTCATCCCGCACTTGCATTCAAGGGTGGAGGACCATACGGGCAAGAAGTGACAAGGGGGCAAGATCTCACTGGGAAGGACTTTAGTGGCAAGACTCTGATCAAACAAGACTTCAAAACGTCCATACTGAGACAAGCCAATTTTAAAGGTGCAAAGCTAATAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCGGAAGCTGATTTGAGAAATGCAGATTTTTCCCTGGCAAATGTGACAAAGGCAAATTTAAGCAATGCTAACTTGGAAGGTGCGCTTGCAACAGGAAATACATCTTTTAAGGGATCGAATATTACAGGCGCTGATTTCACGGATGTGCCACTAAGAGATGATCAACGCGAATACCTCTGCAAAGTTGCTGATGGGGTGAACCCAACAACCGGAAATGCTACGCGTGATACATTGTTCTGCAATTAG 657 0.446 MALVLNVSLCSTSKPRLSLSTSNSKAFPLPLLGLNTKQSRQASQKLTFSLAESVSSATLVAFLSASFIFVHPALAFKGGGPYGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGADLSEADLRNADFSLANVTKANLSNANLEGALATGNTSFKGSNITGADFTDVPLRDDQREYLCKVADGVNPTTGNATRDTLFCN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00376 218 SUPERFAMILY Pentapeptide repeat-like 84 188 - -
Cca01g00376 218 Gene3D - 75 218 - -
Cca01g00376 218 PANTHER THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC 14 218 IPR044213 -
Cca01g00376 218 Pfam Pentapeptide repeats (8 copies) 130 165 IPR001646 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00376 - - gmx:100806792 387.882