Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00372 ATGAGTACATATAGTATGTTGGATATTGTTTTAAATCATATACTTCGGGTGGTCACACCATTACAAGAAGATTGGGAGATACGGTTTGCAATTATTAATGATTTAAGAAGCATTGTTGAATCCGTGGAAAGCCTGAGAGGAGCAACTGTTGAGCCATTTGGGTCATTTGTATCTAGTCTCTTCACACGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTTGCATATTTCATGTGCTGGGAAAAAGCAAAAACAGACTTTATTGGGGGATCTTTTAAAAGCTTTGAGAATGAGAGGTGGGTGGAGCAACTTGCAGTTTATCTCCAATGCACGAGTTCCCATTTTAAAATTTAAAAGCAACCAGCAGGGTGTATCTTGTGACATTTCAATTAATAACCTGCCCGGTCAAATGAAATCTAAGATTTTGCTTTGGATCAGCAAGATAGATGGCCGCTTTCATGATCTGGTTTTACTGGTCAAGGAATGGGCCAAAGCACATAAAATCAATAGCTCTAAAACTGGAACTTTCAACTCCTATTCCCTCAGTTTACTTGTTTTATTTCATTTTCAGACATGTGTTCCTGCAATTTTACCACCACTTAAAGAAATATACCCTGGCAATATGGTTGATGATCTAAGAGGTGTTAGAGCTGATGCAGAGAATCTTATTGCAGAAACATGTGATGCTAATATAAATCGGATCATATCAGACAGATCAAGGTCAATTAACCGAAAATCTTTGCCTGAACTTTTTGTTGAATTCCTAAGGAAGTTTGCTCAGATGGATTCATGGGCATCGGAGCTAGGAATATGCCCGCATACTGGTCAATGGGAACAGATAAAGAACAACATGAGATGGCTACCCCAGACTTATGCAATATTTGTTGAGGATCCTTTTGAGCAGCCACAAAATACTGCGAGATCTGTCAGTGCAGGACAGCTGAAGAAGATATCTGAGGCATTTTTAAGGACGTACAGCTTGCTTATCTCAAAAAATCAGAATCAAAATTCACTTTTGGCCACCTTAGCACCACCATATGTATTAAGATGTCTCACAAAACCTCCCAACAGAAATTACAACGGTCCTATCAGAAATTACAGTGGAGGTTACTTTCAACGAACGCAACCACAAGTGCAGAGATTCATACGCCCACCACCGCCATTGCAACGTCATGTTCAAAATGCCAGTCAAGGAACAAGCTCCAATGGTTCATCGTCAAAAGGACCGGTGCAGGCACAGGCACAGGTGCAAAATGCCAGTCACGGAACAAGCTCCAACAGTCTGTCGTCAAAAGGACAGGTGCAGTTGCAGGCACAGGGACAGGCGCAAATATGGAGGCCAAAGAGTCAAAAGGAATCTCTATAG 1374 0.4098 MSTYSMLDIVLNHILRVVTPLQEDWEIRFAIINDLRSIVESVESLRGATVEPFGSFVSSLFTRWGDLDISIELSNGLHISCAGKKQKQTLLGDLLKALRMRGGWSNLQFISNARVPILKFKSNQQGVSCDISINNLPGQMKSKILLWISKIDGRFHDLVLLVKEWAKAHKINSSKTGTFNSYSLSLLVLFHFQTCVPAILPPLKEIYPGNMVDDLRGVRADAENLIAETCDANINRIISDRSRSINRKSLPELFVEFLRKFAQMDSWASELGICPHTGQWEQIKNNMRWLPQTYAIFVEDPFEQPQNTARSVSAGQLKKISEAFLRTYSLLISKNQNQNSLLATLAPPYVLRCLTKPPNRNYNGPIRNYSGGYFQRTQPQVQRFIRPPPPLQRHVQNASQGTSSNGSSSKGPVQAQAQVQNASHGTSSNSLSSKGQVQLQAQGQAQIWRPKSQKESL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00372 457 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 336 - -
Cca01g00372 457 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 442 - -
Cca01g00372 457 SUPERFAMILY Nucleotidyltransferase 5 149 IPR043519 -
Cca01g00372 457 MobiDBLite consensus disorder prediction 393 457 - -
Cca01g00372 457 Gene3D Beta Polymerase, domain 2 31 151 IPR043519 -
Cca01g00372 457 Pfam Nucleotidyltransferase domain 36 135 IPR002934 GO:0016779
Cca01g00372 457 PANTHER PROTEIN HESO1 1 442 - -
Cca01g00372 457 MobiDBLite consensus disorder prediction 384 457 - -
Cca01g00372 457 CDD NT_PAP_TUTase 27 149 - -
Cca01g00372 457 Gene3D - 152 329 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00372 - - ccaj:109788017 878.241