Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00359 ATGGAGCAGGAAACGGAAAAGAGAAAGGAAGGTAAAAGTGAAGAAAATGAAGAGAAATGGGTGCATGATGCATCTGTGGATTATAAAGGCAGACTTCCTCTCCGTGCTTCCACTGGTGTATGGAAAGCCTCCCTGTTTATCCTTACAATTGAATTTAGTGAAAGGGTATGCCACTTTGGGTTATCCAGTAATCTTATCACGTACCTGACTAAAGTGATGCATAAAGACCTCAATACAGCGACCAAGAATGTAAACTATTGGGTAGGAGCAACAACCCTCATGCCTCTAATTGGAGGATTTGTTGCTGATGCCTACACCGGTAGATATCGTATGATAATCTATTCTTCCCTCGTATACCTAAAGGGACTAAGCATGTTGACCATGTCTCAATTCATGCCAATTCTAAAACCATGCAACAATGAGATATGTGATCGACCAAGGAAGTTTCATGAAGTGGTTTTCTTCTTTGCCCTTTACTGCATCGCCTTGGGAACAGGAGGAGTCATAATTTTTTAA 516 0.4109 MEQETEKRKEGKSEENEEKWVHDASVDYKGRLPLRASTGVWKASLFILTIEFSERVCHFGLSSNLITYLTKVMHKDLNTATKNVNYWVGATTLMPLIGGFVADAYTGRYRMIIYSSLVYLKGLSMLTMSQFMPILKPCNNEICDRPRKFHEVVFFFALYCIALGTGGVIIF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00359 171 Gene3D MFS general substrate transporter like domains 12 170 IPR036259 -
Cca01g00359 171 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6 22 167 - -
Cca01g00359 171 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 167 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g00359 171 Pfam POT family 109 168 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g00359 171 SUPERFAMILY MFS general substrate transporter 42 167 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00359 Cca-Chr1 4146396 4148053 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00359 1 167 Organic Solute Cotransporters AT3G53960 53.293 4.71e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00359 - - ccaj:109788863 344.739