Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00357 ATGGAGCAGGAAATGGAGAAGAGAAATGGAGGTAAAAGTGAAGAAGAGAAATGGGTGCATGATGCATCTGTGGATTATAAGGGCAGAGTTGCTCACCGTGCTTCCACGGGTGTATGGAAAGCTTCACTTTTTGTCCTTGCAATTGAATTTAGTGAAAGGCTAAGTCACTTTGGGATATCCAGTAATCTTATCATGTACCTGGCTAATGTGATGCATGAAGACCTCAAAACAGCAACCAATAATGTAAACTTCTGGAAAGGAGCAACAACCTTGATGCCTCTAATTGGGGGATTTATTGGTGATGCCTACACTGGTCGATTTCGTATGGTCCTCTTTTCCTCCCTCTTATACCTTCAGGGATTAAGCATGTTGACCATGTCTCAATTCATCCCTAGTTTAAAACCATGCAACAATGAGATATGTGATCGGCCAAGGAAGTTTCATGAAGTGGTTTTCTTCCTTGCCCTTTACTGCATCGCCTTGGGAACCGGAGGATTCAAACCATGCTTAGAAAGCTTTGGAGCTGATCAATTTGATGATGAACACCTCGAAGAACGAAAGAAGAAGATGTCTTTCTTCAACTGGTGGACTTTTGTGCTGAGCCTTGCAATGCTGCTTGGCGCAACAGTAGTTGTTTATGTTCAGGACTTTGTGAGCTGGGGAGTTGCTTGTCTCATACTCACTACGTTTATGGCTCTCACTTTCATTGCTTTCTATGTGGGGATGCCCTTTTATAGGTTTAGGGATGCAGAAGGAAACCCTTTCATGCCAATTCTACAAGTCCTAGTTGCGGCTATAAGGAAAAGGAATTTGTCTTCTCCTTCAAATCCTGCCCTATTGTATGAAGTCCCAAAGTCAGACAAAGGAAGGCTTCTAAACCATACTAGTAGGCTCAGGTTTCTTGACAAGGCTGCAATAGTTGAAGAAAAGTATACTGGGCAGAAAGTGAGTTCATGGAGATTAACAACAGTGACAAGAGTGGAGGAGACAAAGCTTATTCTGAATGTTGTTCCCATGTGGCTCACCTCATTATTAGTTGGAGTATCTGTAGCACAAGGCGGAACACTCTTTGTTAAACAAGCAGCTTCTATGAACCTAAAGATAAGTGACAACTTCAAAATCCCACCAGCTTCCATGAGTTCCCTTGCAGCTTTTGGCAGCATAATATCTGTCCCAATATACGATAAGATCATTGTTCCAGTTATGAGGAAAGCCACTGGTAACGAAAGAGgcatcagcatccttatgaggattggcattggcttagcattatcaATCATAATCATGGTTGTTACTGCCTCGGTAGAAACAAAGAGATATAGATTGGGTGAGACAATGAGTGTGTTGTGGCTGATACCCCAATACTTGATCCTTGGCCTTCAATATACATTTTCTCTGGTTGGTCTGCAAGAGTATTTCTATGACCAAGTTCCTGACTCAATGAGAAGCTTAGGAATGGCTTTGTATCTTAGTGTGCTTGGAGTAGGGTACTTCTTAAACAGCTTTCTGATCATGATTGTGGACCATGTCACGGGGAAGAATGGGAAGAGTTGGATTGGAAAAGATATAAACTCAAGTCGTTTGGATAAGTTTTATTGGATGTTGACTATGGTAAATACTTTGAATTTGTGTCTCTTTCTATTGTTTGCGAAGATGTATACTTATAAGACCGTACAGAGGAAAGCTAGGGAAAATGAAATTGATGATGGGGTGGTTACAATGGCATGA 1728 0.4045 MEQEMEKRNGGKSEEEKWVHDASVDYKGRVAHRASTGVWKASLFVLAIEFSERLSHFGISSNLIMYLANVMHEDLKTATNNVNFWKGATTLMPLIGGFIGDAYTGRFRMVLFSSLLYLQGLSMLTMSQFIPSLKPCNNEICDRPRKFHEVVFFLALYCIALGTGGFKPCLESFGADQFDDEHLEERKKKMSFFNWWTFVLSLAMLLGATVVVYVQDFVSWGVACLILTTFMALTFIAFYVGMPFYRFRDAEGNPFMPILQVLVAAIRKRNLSSPSNPALLYEVPKSDKGRLLNHTSRLRFLDKAAIVEEKYTGQKVSSWRLTTVTRVEETKLILNVVPMWLTSLLVGVSVAQGGTLFVKQAASMNLKISDNFKIPPASMSSLAAFGSIISVPIYDKIIVPVMRKATGNERGISILMRIGIGLALSIIIMVVTASVETKRYRLGETMSVLWLIPQYLILGLQYTFSLVGLQEYFYDQVPDSMRSLGMALYLSVLGVGYFLNSFLIMIVDHVTGKNGKSWIGKDINSSRLDKFYWMLTMVNTLNLCLFLLFAKMYTYKTVQRKARENEIDDGVVTMA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00357 575 SUPERFAMILY MFS general substrate transporter 35 560 IPR036259 -
Cca01g00357 575 Gene3D MFS general substrate transporter like domains 11 562 IPR036259 -
Cca01g00357 575 Pfam POT family 107 515 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g00357 575 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 24 560 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g00357 575 PANTHER OS03G0204700 PROTEIN 24 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00357 Cca-Chr1 4112572 4115813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00357 14 559 Organic Solute Cotransporters AT3G53960 54.011 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00357 - - gmx:102659718 901.353