Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00355 ATGGAGCAAGATACGGAGAAGAAAAAGCGAGATAGAATTGAAGTGAGTGAAGAGAAATGGGTACATGATGCATCTGTGGATTATAAAGGCAGAGTTCCTCTCCGTGCTTCCACTGGTGTATGGAAAGCCTCCCTGTTTGTCCTCACAATTGAATTTAGTGAAAGGGTAAGCTACTTTGGGATAGCCACTAATCTTATCTCGTACCTAACTAAAGTCATACACGAAGATCTCCAAACAGCAGCCAAGAATGTAAACTACTGGTCAGGAACAACAACCTTGATCCCTCTTATTGGGGGATTTATTGCTGATGCCTACACTGGTCGATTTTACATGATCCTCTTTTCTTCCTTTGTATACCTCGTGGGATTAAGCCTGTTGGCCATGTCTCAATTCATCCCAAGTCTAAAGGCCTGCAACACTAAGATATGCCATAAGCCTAGGAAGGTTCATGAAGTGGTTTTCTTCCTTGCCCTTTACTGCATCTCCTTAGGTTCTGGAGGATACAAACCATGCTTGGAAAGCTTTGGAGCTGATCAATTTGATGATGATAACTTGAAAGAAAGGAAGAAAAAGATGTCTTTCTTTAACTGGTGGAACTTTGCACTGTGCTTTGCATTGCTGCTTGGTGCAACAGTGGTTGTTTATATCCAAGACTTTGTTGGCTGGGGAGCTGCCGGTCTTACCCTCACTATTTTTATGGCTCTCACCATCATAGCTTTTTATGTGGGAAAATCATTTTACAGGTACAGGAGGGCAGATGGAAACCCTCTAACACCATTTTTACAGGTCTTAATTGCAGCAATGAGGAAAAGGAATCTACCTTGCCCTTCAAATCCTGCTTTGTTGCATGAGGTCCCAGAGAAGTCCCAAGGAAGGCTTCTGACCCACACTAACGGGCTAAGGTTTCTTGACAAGGCTGCAATAGTTGAAGAGAAACATGTTGAGCAGAAGGAGAATCCATGGAGATTAGCAACAGTGACAAGAGTGGAGGAGACAAAGCTTGTTATTAATGTAGTTCCCATATGGTTAACTTCATTAATAGTTGGAATATGTGTGGCACAAGGTTCAACACTCTTTGTCAAACAAGCAGCTGGTATGAACTTAAAGATAACCGACAGTTTCAAAATCCCACCAGCTTCCATGGCATCTATTTCAGCTGTTGGTACCATAATATCTGTCCCAATATACGATAGGATCATAGTTCCAATTCTGAGAAAAGTCACAGGTAATGAAAGAGGCATCAGCATCCTTAGGAGGATCAGTGTTGGCTTGTCATTATCAGTCATACTCATGGTTGTTGCTGCCTTGGTAGAAGCAAAGAGACTAAGAATGGCTAAACATGAAGTCCTCATAATAGGGGAAACTAGTGAAAAGACAATGAGTGTGTTGTGGTTGATACCCCAATACTTGATCCTTGGCCTTGGAGATTCCTTTTCTCTAGTTGGTTTGCAAGAATATTTCTATGACCAAGTTCCTGACTCAATGAGAAGCTTGGGAATGGCTTTGTATCTTAGTGTGCTGGGAGGAGGATTCTTCTTAAGCAGCTTTCTGATCACCATTGTGGATCATGTAACGGGGAAGAATGGGAAGAGTTGGATTGGGAAGGATATAAACTCAAGTCGTTTGGATAAGTTTTATTGGATGTTGGCTGTCATAAACGCTTTGGATTTCTGTGCCTTTCTCTTTCTGGCAAAAAGGTATACTTATAAGACCACACAGAGGAGAGCTATGGAAACTGACTGTTGCAAGAGTGGTGAGATGGAGATGGTGGCCTGA 1776 0.4217 MEQDTEKKKRDRIEVSEEKWVHDASVDYKGRVPLRASTGVWKASLFVLTIEFSERVSYFGIATNLISYLTKVIHEDLQTAAKNVNYWSGTTTLIPLIGGFIADAYTGRFYMILFSSFVYLVGLSLLAMSQFIPSLKACNTKICHKPRKVHEVVFFLALYCISLGSGGYKPCLESFGADQFDDDNLKERKKKMSFFNWWNFALCFALLLGATVVVYIQDFVGWGAAGLTLTIFMALTIIAFYVGKSFYRYRRADGNPLTPFLQVLIAAMRKRNLPCPSNPALLHEVPEKSQGRLLTHTNGLRFLDKAAIVEEKHVEQKENPWRLATVTRVEETKLVINVVPIWLTSLIVGICVAQGSTLFVKQAAGMNLKITDSFKIPPASMASISAVGTIISVPIYDRIIVPILRKVTGNERGISILRRISVGLSLSVILMVVAALVEAKRLRMAKHEVLIIGETSEKTMSVLWLIPQYLILGLGDSFSLVGLQEYFYDQVPDSMRSLGMALYLSVLGGGFFLSSFLITIVDHVTGKNGKSWIGKDINSSRLDKFYWMLAVINALDFCAFLFLAKRYTYKTTQRRAMETDCCKSGEMEMVA 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00355 591 Gene3D MFS general substrate transporter like domains 12 576 IPR036259 -
Cca01g00355 591 PANTHER OS03G0204700 PROTEIN 26 575 - -
Cca01g00355 591 CDD MFS_NPF5 41 569 IPR044739 GO:0042937|GO:0042938|GO:0071916
Cca01g00355 591 Pfam POT family 111 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g00355 591 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 26 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g00355 591 SUPERFAMILY MFS general substrate transporter 37 568 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00355 Cca-Chr1 4090363 4093480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00355 1 573 Organic Solute Cotransporters AT3G53960 55.690 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00355 - - gmx:102660397 1002.66