Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00344 ATGGAGGGAGTGGAAAGAAAGGGGCGGAGGTTGTTGCTTATCCCTTTGCCACTCCAAGGTCACATAAACCCCATGCTCCACCTCGCTCAGATCCTCTACTCCAACGCTTTCTCCATCACCATCCTTCACACAACCTTCAACTCCCCAGACCCTTCTAACTACCCTCACTTCAACTTCTCTTGCATCCAAGAACCTTCCTCCCTCTGCCTCTCCCAATCCTCTGCTTCCCATCTCTTGAATTTCCTCCTCGCTCTCAACGCTCAATGCGTCACGCCATTCCAGGAGTGCGTCACAAAGTTACTGTCGGAGGAACCTCAACCTGTGGCCTGCTTGATCTCCGATGCTTTGTGTTACTTCACACAAGGCGTCGCCGACAAGCTTCGCCTCCCCAGGATTGTGCTGAGAACGGGTGGAGTTTCTTCCTTCGTTGCTTTCGCCGCGTTTCCCTTTCTCAGACTAAAAGGTTACATTCCCATACAAGATTGCAAATTGGAGGAGGCAGTGACAGAGGTACCACCACTGAGAGTGAAAGACTTACCTACGGTGAAGACAGAGGAGCCAGAGAAATACTATGAATTATTACACAGATTTGTCAACGAGACCAAGAATTCCTTGGGAGTGATTTGGAACTCCTTTCAGGAGTTGGAATCATCTGCACTAACAAAACTGAGCCAAGAGTTTTCCTTTTCCATGCCAATGTTCCCAATAGGTCCCTTTCACAAGTACTTTCctacttcttcttcttcttcttGTAGCAGCTTAATATCACAAGACCAAAGTTGCATCTCTTGGTTAGACAAACACTCACCCAACTCTGTGCTCTACGTGAGTTTTGGGAGTGTTGCTGCAATAACTGAGACAGATTTCTTAGAGATAGCTTGGGGTTTAGCCAACAGCAACCACCCTTTTTTGTGGGTGGTTCGACCGGGCCTGATCATGGGCTCAAAATGGCTCGAACCCCTACCAAGTGGGCTCATGGAGAATTTGGAAGGCCGGGGCCTCATAGTGAAATGGGCCCCCCAACTAGAAGTCTTGGCCCACTCAGCAGTTGGTGCATTTTGGACTCATAATGGTTGGAATTCAACCTTGGAGAGTATTTGTGAAGGGGTTCCTATGATATGCATGCCATGTTTCACGGACCAAAAAGTGAATGCAAGGTATGTGAGTCATGTTTGGAGGATTGGGTTGCAACTAGAAAATGGTGTGGAGAGAGGGGAAATAGAAAGGGCCATTAGAAGGTTGATGGATGTGAATGCTGAAGGGAAGGAGATTAGAGATAGGGCCTTGAAATTGAAGGAAGAGGTAAAGCTTTGCTTGAAAACAGGTGGTTCCTCTTGCTCTTCTTTGGAAGCCTTGGTTACTTACATTCTGTCATTAGAGTCATCTACTTTTCAAGCCTCTTGA 1404 0.4672 MEGVERKGRRLLLIPLPLQGHINPMLHLAQILYSNAFSITILHTTFNSPDPSNYPHFNFSCIQEPSSLCLSQSSASHLLNFLLALNAQCVTPFQECVTKLLSEEPQPVACLISDALCYFTQGVADKLRLPRIVLRTGGVSSFVAFAAFPFLRLKGYIPIQDCKLEEAVTEVPPLRVKDLPTVKTEEPEKYYELLHRFVNETKNSLGVIWNSFQELESSALTKLSQEFSFSMPMFPIGPFHKYFPTSSSSSCSSLISQDQSCISWLDKHSPNSVLYVSFGSVAAITETDFLEIAWGLANSNHPFLWVVRPGLIMGSKWLEPLPSGLMENLEGRGLIVKWAPQLEVLAHSAVGAFWTHNGWNSTLESICEGVPMICMPCFTDQKVNARYVSHVWRIGLQLENGVERGEIERAIRRLMDVNAEGKEIRDRALKLKEEVKLCLKTGGSSCSSLEALVTYILSLESSTFQAS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00344 467 CDD GT1_Gtf-like 19 437 IPR002213 GO:0008194
Cca01g00344 467 Gene3D Glycogen Phosphorylase B; 12 453 - -
Cca01g00344 467 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 457 - -
Cca01g00344 467 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 268 416 IPR002213 GO:0008194
Cca01g00344 467 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 458 - -
Cca01g00344 467 Gene3D Glycogen Phosphorylase B; 259 438 - -
Cca01g00344 467 Coils Coil 414 434 - -
Cca01g00344 467 PANTHER UDP-GLYCOSYLTRANSFERASE 76C2-LIKE 6 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00344 Cca-Chr1 3951109 3954301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00344 5 466 Glycosyltransferase AT3G55700 51.812 3.52e-170 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00344 - - gmx:100796525 620.928