Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00343 ATGGAGGAAAATCAAAGGTTGTTTCTTATGGCGTCACCGTTACAAGGGCACATAACGCCGTTACTCCACCTGGCAGACATCCTGTTCTCGAAGGGGTTCTCCATCACCATCGTCCACACCCTCTTCAACTCCCCCGACCCTGCTTCCTACCCTCACTTCGATTTCCGCTCCATCTCCGATGGGTTATCCCAAACGGAAGCCTCCACGCTCGACGCCGTGCACCTCACCGACCTCATCAATGTCCGATGCAGAAACCCTCTCAGGGACTTATTGGCTGCGGCGCTGTCTCAGTGTAGGCAACGTGTTCCTTGCTTCATCGCCGACGCTGCCCTTCATTTCACTCAAACCGTGTGTGATGAGTTGAAGCTCCCGCGCCTTGTTCTCAGAACTGGTGCTGCTTCCTCTTTTCTTGTTTTTGCCTCCTTTCCTCTCCTTAGACAAAAGGGTTACCTCCCCGTACAAGAATCTCGATTGGAGGAGCCTGTGGTGGATCTTCCACCGCTTAAAGTGAAAGACCTTCCTAAGTTTCCGTCACAGGACCCCGAGGCATTCTATAAGCTAGTTTGTCGTTTTGTTGAGGAATGCAAGGCATCTTCGGGGGTTATTTGGAACACCTTTGAAGAGTTGGAATCATCTGCATTGACAAAACTGCGCCAAGATTTGTCCGTACCAATGTACCCTATAGGTCCTTTTCACAAACATTGTCTTACAGGTTCAACTTCTTCTACTAGCTTGTTGACCCCAGACAAAAGCTGCATGTCTTGGTTAGACACACAAGAACGTCGAAGTGTTGTTTATGTGAGTTTTGGGAGTATTGCAGCTATAAGTGAGGCCGAGTTCTTGGAGATAGCTTGCGGGTTAGCCAACAGCAAGCAACCATTCTTGTGGGTGGTTCGACCTGGGCTAATTCATGGCTCAGAATGGCTTGAACCATTGCCAAGTGGATTCCTAGAGAATTTGGGAGGAAGAGGCTACATTGTCAAATGGGCTCCTCAAGAACAAGTGCTGAGCCATCCTGCAGTGGGAGCATTTTGGACTCATAATGGTTGGAACTCAACGTTGGAGAGCATATGTGAAGGGGTTCCAATGATTTGTATGCCTTGTTTTGCTGACCAAAAGGTCAATGCCAAATATGCAAGCGATGTTTGGAAGGTTGGGGTGCATTTACAGAATAAGCTAGAGAGAGGAGAGGTAGAGAAGACCATAAAAAAACTAATGGTTGGGGATGAAGTGAACGAGATTAGAGAGAATGCCTTCAATTTGAAGGAAAAGGCAAGTGTTTGCTTGAAACAAGGTGGTTCGTCTTACAATTTCCTTGATAGCTTGGTTAGTGACATATTTTCGCTGGAGTCTTCTACTTCTAAAGCTCATTGA 1374 0.4731 MEENQRLFLMASPLQGHITPLLHLADILFSKGFSITIVHTLFNSPDPASYPHFDFRSISDGLSQTEASTLDAVHLTDLINVRCRNPLRDLLAAALSQCRQRVPCFIADAALHFTQTVCDELKLPRLVLRTGAASSFLVFASFPLLRQKGYLPVQESRLEEPVVDLPPLKVKDLPKFPSQDPEAFYKLVCRFVEECKASSGVIWNTFEELESSALTKLRQDLSVPMYPIGPFHKHCLTGSTSSTSLLTPDKSCMSWLDTQERRSVVYVSFGSIAAISEAEFLEIACGLANSKQPFLWVVRPGLIHGSEWLEPLPSGFLENLGGRGYIVKWAPQEQVLSHPAVGAFWTHNGWNSTLESICEGVPMICMPCFADQKVNAKYASDVWKVGVHLQNKLERGEVEKTIKKLMVGDEVNEIRENAFNLKEKASVCLKQGGSSYNFLDSLVSDIFSLESSTSKAH 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00343 457 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 4 450 - -
Cca01g00343 457 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 447 - -
Cca01g00343 457 CDD GT1_Gtf-like 6 427 IPR002213 GO:0008194
Cca01g00343 457 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 258 409 IPR002213 GO:0008194
Cca01g00343 457 PANTHER CYTOKININ 7-BETA-GLUCOSYLTRANSFERASE-RELATED 4 450 - -
Cca01g00343 457 Gene3D Glycogen Phosphorylase B; 247 427 - -
Cca01g00343 457 Gene3D Glycogen Phosphorylase B; 8 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00343 Cca-Chr1 3947661 3949596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00343 1 451 Glycosyltransferase AT3G55700 51.948 9.42e-168 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00343 - - gmx:100783133 790.801