Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00342 ATGAAGAAGCTTTGTCCCAATCTTGATCGGGAGGATGGGCTCGAAACCGTGCTTGAGGTCCCTATCCCGGAGGAGATTCTCACCCACAAGAGTGGAACCACCAAAGCTTGGCACAACATGAAGAACTGGATGAAGCCACACTCTGAATCGAGATCATCGTCAGCATCCATGACAGCAGTTTTTGGAGGCAAAAACACTGAGATTCAGCTTCTGTTAGGTGTTGTTGGAGCGCCATTAATCCCTTCACCTATCGCCTCTGACAACCAACCCATCACTCGCAGCATTAAAGACCAACACATTGAGGTTTCGATGGCTAAATATATAGTGAAGCAGTATGTGGCGGCTGTGGGAGGGGAACGTGCTTTGAATTGTGTGGACAGCATGTATGCAATGGGGCAGGTCAAGATGGGGACTTCTGAGTTTTGTGCAGGAGAAGGGAGTGTGAATAGTAAGAAGGTGGTGAAGGTGAAGAACTTGCAGATGAAGGGAGAGGTGGGGGGTTTCGTGGTGTGGCAGAAGAGGCCAGAGTTGTGGTGCTTGGAGCTTGTGGTTTCTGGCTACAAGATCAGTGCTGGTAGTGATGGTAAAGTGGCATGGAGGCAAACCCCTTGGCATCATTCTCATGCTTCTCGTGGACCACCAAGACCTCTTAGACGTTTCTTACAGGGTCTTGATCCAAGGTCGACGGCTAATTTGTTCGGCAACTCCATATGCATCGGAGAGAAGACAGTGAACAACGAAGATTGTTTCATATTGAAACTCGAAGCTGAGCCATCCACGCTGCGAGCGAGGAGCAACAGCAACGTAGAGATAGTTCGCCACTCGGTGTGGGGCTACTTCAGCCAAAGAACAGGGCTATTAGTGCAACTAGAAGACTCACACTTACTCAAACTCAAGTCTCATCATGAAAACGAGAACATATACTGGGAAACCAACATGGAGTCCCTCATACAAGACTACAGGGCCGTTGATGGCATCCAAATAGCACACGCTGGGAAGACTAGGGTGTCCTTGTTAAGGTTTGGTGGGGGCCCCGAGACACATTCCAAGACAAGAATGGAAGAGGTTTGGCAAGTTGAGGAAGTGGATTTTAACATCAAAGGGTTGTCCCTGGATTGCTTTTTACCTCCTAGTGATTTGAAGAGAGAGGAAGAGGAAGAGTCAGAGTGTGGTGGTGGGGTGGTTGCAAGCAATAATGCCAAGTTACCCTACAAGATTCGTTCGGCTTCTTTTAGGATTAGTGCTTCCAAAGTAGCGGCTGTCAACTTGGATGACTCGTGTACCAGTGAAAGCGATGAAGATTTGTAA 1308 0.4832 MKKLCPNLDREDGLETVLEVPIPEEILTHKSGTTKAWHNMKNWMKPHSESRSSSASMTAVFGGKNTEIQLLLGVVGAPLIPSPIASDNQPITRSIKDQHIEVSMAKYIVKQYVAAVGGERALNCVDSMYAMGQVKMGTSEFCAGEGSVNSKKVVKVKNLQMKGEVGGFVVWQKRPELWCLELVVSGYKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFGNSICIGEKTVNNEDCFILKLEAEPSTLRARSNSNVEIVRHSVWGYFSQRTGLLVQLEDSHLLKLKSHHENENIYWETNMESLIQDYRAVDGIQIAHAGKTRVSLLRFGGGPETHSKTRMEEVWQVEEVDFNIKGLSLDCFLPPSDLKREEEEESECGGGVVASNNAKLPYKIRSASFRISASKVAAVNLDDSCTSESDEDL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00342 435 PANTHER LIPASE 1 428 - -
Cca01g00342 435 PANTHER LIPASE 1 428 IPR006873 -
Cca01g00342 435 Pfam Protein of unknown function (DUF620) 128 377 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00342 Cca-Chr1 3943799 3947540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00342 - - gmx:100782214 793.112