Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00340 atggtggcattctccttctccttctccttctccatcctcttctccctcatcctcatcacacaatcctcttcttcttcctccacccacctctcCAACTTCCACCCCGACATCCAACTCTCCGGCGACGCCCACGTCGTCGCCGCAACCCACGTCAGACTCACGCGCGCAGCCCCTTCCTCCTCCGGCCTCCTCCGCGGCCTCCACCCTCTCGCATTCTCCTCGCCGGCCACctccctctccaccgacttctccttcgccgtctccCCCGTGCCCGGCGACGGCTTCCTCCTCATCCTGGCCCCCGCCGCCGCCGGCAACGTCTCGGACTTCGTGGCCGTGGAGTTCCACGCATCCAGCGACGAGAACAAGAGAAACCAGGTGGGCATCGACGTGGGAAGCCGCGTCTCGGTGGCCGGCGCGAACGTCCCAGACGTGAATCTGGTTCTGAACAGCGGCGAAAAGTTGAAGGCTTGGGTGGATTACGAGGGAAGTTCGAAGGCATTGGAAGTTAGGTTAAGCAAATTGGGGGAAGAGAAGCCTGGGAAGCCTATGGTGTCTCATTGGATCGATTTTTTTGAGATGTGGGGTGGGGATCCTGTGTTCGCCGGTATTAGTTCTTCCAATGGGCCCCATTCGGCCCAGGTTGTGACTGTTTACTCGTGGAGGCTTACTTTGAGGGATGCTTCCAAGGGGTTGCATTCTATGCCTGCTGATCCACGTCCGCCCTCTCAGGACGACCACCGTATGTTTTGTCCCTTGACGCTTCTCGCTGGCCTTATTTTCGGAACTGGCTGCGTTGCCTTGTTCACTTTTGTTGTGCTCTTCACTTGGGTCATCTTCTTACCTGGCCGTCAAGATCACTCTCTTGTCAAAATCCCTGACCACCCTCATGATATCAGGTACCAGAGAATTGATGTCGCTGTTGACAAGAATGCGCAACATGATGAAACCTAG 954 0.4969 MVAFSFSFSFSILFSLILITQSSSSSSTHLSNFHPDIQLSGDAHVVAATHVRLTRAAPSSSGLLRGLHPLAFSSPATSLSTDFSFAVSPVPGDGFLLILAPAAAGNVSDFVAVEFHASSDENKRNQVGIDVGSRVSVAGANVPDVNLVLNSGEKLKAWVDYEGSSKALEVRLSKLGEEKPGKPMVSHWIDFFEMWGGDPVFAGISSSNGPHSAQVVTVYSWRLTLRDASKGLHSMPADPRPPSQDDHRMFCPLTLLAGLIFGTGCVALFTFVVLFTWVIFLPGRQDHSLVKIPDHPHDIRYQRIDVAVDKNAQHDET 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00340 317 Pfam Legume lectin domain 31 230 IPR001220 GO:0030246
Cca01g00340 317 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 224 IPR013320 -
Cca01g00340 317 Gene3D - 19 224 - -
Cca01g00340 317 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 3 316 - -
Cca01g00340 317 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 3 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00340 Cca-Chr1 3894905 3896364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00340 35 309 Receptor kinase-like Gene Family AT3G55550 26.582 1.85e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00340 - - vra:106757171 349.362