Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00320 ATGGCGTCATCGCGTCCCCCTCCGTCGAAATCAGTGGATCTGGACCTGACGATCGTGTCGGCGAAGCACCTGAAGAACGTGAACTGGAAGAACGGCGATCTGAAGGCATACGTGGTGTTCTGGGTGGACCCTGAGCGGCGGCTGGCGACGAAATCCGACGAGTCCGGGTCCACCTCCCCCGTCTGGAACGAGCGCTTCGCCctccctctccctctccctctccccctccacgactcctccctcaccctcGAGATATTCCACTCCAAACCCTCCGACACCCCGAAACCCCTGGTGGCCACCCTCCGCCTCCCCCTCAAAGACCTCCACGACCTCCACGACTCCTCCCGCCTCCGCAAGTTCCCCCTCTCCCGCCCCTCCGGCCGTCCCCACGGCAAGATCCACCTCAAACTCGGCCTCCTCCCCCGCCCCCAATCCCTCGATTacccaaaccctaaccctaacactaaccctaacTTCCTCTGCTACCGAGGCTACTCCCCGCCCCCCCCTCCTTACTCTTCCTACACTTCTTACCCTGACTCCTATGCTGGATACTACCCCGGTTATTATTCTGGCGccccccccccccccccccccccccccAGGCCCTTCTTTGACCGCTACGCTGGGCCCACTGGGCCTTCCGCCCCTCTCGACTATTCCTCCGCCTACGACCCCAAGCCCAAGGGGGCTCCCAAATTGGGCCTCGGTACTGGCCTCGCTGTTGGCGCTGTTGCTGGAGCCCTCGGCGGCCTCGCTCTCGAAGAGGGACTCAAATACGAAGAGGACAGAATCGCCGAGAGGGTCGAGAACGACGTCGCCCGCGACGATTTCAGCGATTACCGAGTAGATTACTGA 858 0.5466 MASSRPPPSKSVDLDLTIVSAKHLKNVNWKNGDLKAYVVFWVDPERRLATKSDESGSTSPVWNERFALPLPLPLPLHDSSLTLEIFHSKPSDTPKPLVATLRLPLKDLHDLHDSSRLRKFPLSRPSGRPHGKIHLKLGLLPRPQSLDYPNPNPNTNPNFLCYRGYSPPPPPYSSYTSYPDSYAGYYPGYYSGAPPPPPPPPRPFFDRYAGPTGPSAPLDYSSAYDPKPKGAPKLGLGTGLAVGAVAGALGGLALEEGLKYEEDRIAERVENDVARDDFSDYRVDY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00320 285 CDD C2_SRC2_like 13 135 IPR044750 GO:0006952
Cca01g00320 285 ProSiteProfiles C2 domain profile. 1 122 IPR000008 -
Cca01g00320 285 PANTHER INGRESSION PROTEIN FIC1 8 281 - -
Cca01g00320 285 Gene3D C2 domain 10 156 IPR035892 -
Cca01g00320 285 SMART C2_3c 13 117 IPR000008 -
Cca01g00320 285 MobiDBLite consensus disorder prediction 193 232 - -
Cca01g00320 285 Pfam C2 domain 13 110 IPR000008 -
Cca01g00320 285 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 143 IPR035892 -
Cca01g00320 285 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 8 281 - -
Cca01g00320 285 MobiDBLite consensus disorder prediction 193 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00320 Cca-Chr1 3577664 3579405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00320 - - gmx:102666594 386.726