Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00309 ATGGCAAGTAGCAGCCGCAGCAACAACCCAATGGAAAGCGTGGTGGTGGAGTGCGGAAGGCGTCGAGCCTCGTGCGGCTATTGCAGATCTTCCCTTCACAATAGCATCTCTCATGGCATGTGGGCGCATAGCCTTACAGTGGATGACTACCAAGATCTTCTTGATCGTGGCTGGAGAAGGTCTGGATGTTTTCTCTATAAACCAGAGATGGAAAGGACTTGTTGCCCTTCTTATACAATTCGCTTGAAAGCAACTCACTTTCTTCCTACTAAGGACCAACTCCGTGTATCTAGACGAATGCAAAGGTTTTTAGATGGAACCCTCGGGGGCCCGAATACTTCAACCAAATCAGAAAACTCCTCCAGATCTATGTCTGAAGAATCCCTACCTGCTGCTAATGAAGAGGTCGATCAAGTTCAAAATTCTATCAACGGTTTATCAAGCCAAATTGATAATGTAATACACGTGCTTATTGAGAAGGGGGAATTTCCCCCTGGCATTCAATTACCAAAAGCTTCAGTAAAGAAAGTTTCACAGGGAAGAAGGAAATTACTAATTAGTGGATCTGAAGATCTCTTATATAGTAGCAATATAGCCTTTCAAATTGCAGCATATATAAAACGAGCGCAATCATGTGACAAGGTTGGTAATGATTCCAAACCATCAAAAGTTTGTGAAAAGGAGAATGAATCCTCTCATAAAATTATTGCGGAAAAGCTAGTGGCGTCTTTAGATTCAACAGTGAAAAATTATGGTTTGTCTATCAGGGCTTGCAATGGACATATCAATTTTTATGCTTCTAGTGAGCAAATTTCCCCTAGCAGAGGTGATCAAAATGTTCCTGTTCCTAACAATTCTAGAATGAAGCATGATACTGGAGGAAATCGTTTGCTTCGTTCTGAACATTGTCAGGTAAAAAGGCGAAAGCTTGAAATTCGTTTAAACAGATCCAGTTTTGATCCAGAAGAATTTGCTCTGTACAGAAAATATCAGCTCAAAGTACATAATGATAAACCACACAATGTCACAGAGAATTCATATCGCAGGTTTTTGGTTGATACTCCATTATTAGAAGTTTCTCCTACTGGTGATAACACAGTTCCTCCTTGTGGTTTTGGCTCTTTCCATCAACAATATCTAATAGACGGCCAGTTAGTGGCTGTTGGTGTTATAGATATCCTTCCCAATTGTTTGTCAAGTAAATATTTGTTCTGGGATCCAGACTTTGCCTTTCTATCACTAGGCAAGTACTCAGCGATTCAAGAAATAGGTTGGGTGAAAGAAAACCAGGTTTATTGTCCTAGTCTACAATATTATTATCTTGGCTACTATATTCACTCTTGCAACAAGATGAGATACAAAGCTGCATATCGCCCGTCAGAGCTTTTATGTCCTCTACGTTATCAGTGGGTTCCATTTGACATTGCGAGGCCTCTACTCGACAGAAAACCTTATGTTGTCTTATCAGATTTTTCCAATTTAGAAAATGTAGAGTCATCCCTACCTCAAATTACTGATGATGTAATGGGAAGGGAGCTTGATGATGTTGGCCAAGAAGATGCAAATGATGTTCCCATGCTTGAAGATGAAGAGATGGTTGAGTCTGAATCAGAATTCTCTGACGATGAACCTGACCTAGAAACTACTTCATATGATGATCCAGAAATTGGAGATGTCAGCAAGGTTTTGCTAGGGATAAAGGGTTCTCGTGTGAAATACGAGGATCTGCGGAATGTCTTTGCTCCTAAGCAGCGGAGTTACTTTGAGTCACAGTTACGGAGATACAGGAGGGTCGTGGGTACAGTGCTATCAGAGCGAATGGTCTATTCTATCGGATAA 1839 0.4084 MASSSRSNNPMESVVVECGRRRASCGYCRSSLHNSISHGMWAHSLTVDDYQDLLDRGWRRSGCFLYKPEMERTCCPSYTIRLKATHFLPTKDQLRVSRRMQRFLDGTLGGPNTSTKSENSSRSMSEESLPAANEEVDQVQNSINGLSSQIDNVIHVLIEKGEFPPGIQLPKASVKKVSQGRRKLLISGSEDLLYSSNIAFQIAAYIKRAQSCDKVGNDSKPSKVCEKENESSHKIIAEKLVASLDSTVKNYGLSIRACNGHINFYASSEQISPSRGDQNVPVPNNSRMKHDTGGNRLLRSEHCQVKRRKLEIRLNRSSFDPEEFALYRKYQLKVHNDKPHNVTENSYRRFLVDTPLLEVSPTGDNTVPPCGFGSFHQQYLIDGQLVAVGVIDILPNCLSSKYLFWDPDFAFLSLGKYSAIQEIGWVKENQVYCPSLQYYYLGYYIHSCNKMRYKAAYRPSELLCPLRYQWVPFDIARPLLDRKPYVVLSDFSNLENVESSLPQITDDVMGRELDDVGQEDANDVPMLEDEEMVESESEFSDDEPDLETTSYDDPEIGDVSKVLLGIKGSRVKYEDLRNVFAPKQRSYFESQLRRYRRVVGTVLSERMVYSIG 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00309 612 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 312 477 IPR016181 -
Cca01g00309 612 PANTHER ARGININE-TRNA-PROTEIN TRANSFERASE 1 1 610 IPR030700 -
Cca01g00309 612 Pfam Arginine-tRNA-protein transferase, C terminus 322 464 IPR007472 GO:0004057|GO:0016598
Cca01g00309 612 PIRSF ATE1_euk 3 612 IPR017137 GO:0004057|GO:0016598
Cca01g00309 612 MobiDBLite consensus disorder prediction 529 552 - -
Cca01g00309 612 PANTHER ARGINYL-TRNA--PROTEIN TRANSFERASE 2 1 610 - -
Cca01g00309 612 Pfam Arginine-tRNA-protein transferase, N terminus 24 93 IPR007471 GO:0004057|GO:0016598
Cca01g00309 612 MobiDBLite consensus disorder prediction 107 133 - -
Cca01g00309 612 MobiDBLite consensus disorder prediction 104 133 - -
Cca01g00309 612 Coils Coil 129 149 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00309 K00685 - gmx:100780234 991.875