Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00305 ATGGGTTTTTCCTCAAAAGAAGAGAAATCCAAGAGGATATTGAGGGGCTTCAAGACTTTGTTCTTCTTGATCACTATGGTTATATCGCTTCTTCTCTTCTCAGCCCCAATTCTCCTCGTTATTGCCGATGCActtcttccttctgctcttctctccactctctccccttcttccttctccttcGAAAATCTAGCTTCCCATTTCCACAACTACGATTTTCGTTACTCCCTCATTGACATACCCCTCGTCTCCTTAATTCGATCCTTCATCATCTTCTGTGTTTATAGTTTGTGTGATGGACCAAGGCTTTCGCGAGGGCCTTATTTGGGGATCACGACGATGTGTTCCGTTTTGTCTCTGATGTTCGTGTCGTTCAAAGCCGTTTACATCTTCAGTGTTTCTGGTTTCGATCGAAGTGGGTATGTCGGAGCCACTCTGTTCGTGTGTTCTTGTACGTTGGCAGTGGGGCATGTTGTCGTGGCCTACAGAACAAGTTGCAGGGAAAGGAGGAAGCTTTTGGTCTACAAAATTGACATTGAAGCTATTTCGGCTTGCAAAAATGGGTATCCCAGGTATCCCAAGATTCCTCAGGAAGAAAGAATCAAATGA 609 0.4056 MGFSSKEEKSKRILRGFKTLFFLITMVISLLLFSAPILLVIADALLPSALLSTLSPSSFSFENLASHFHNYDFRYSLIDIPLVSLIRSFIIFCVYSLCDGPRLSRGPYLGITTMCSVLSLMFVSFKAVYIFSVSGFDRSGYVGATLFVCSCTLAVGHVVVAYRTSCRERRKLLVYKIDIEAISACKNGYPRYPKIPQEERIK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00305 202 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 200 - -
Cca01g00305 202 Pfam Cholesterol-capturing domain 61 155 IPR019498 -
Cca01g00305 202 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00305 Cca-Chr1 3291025 3293859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00305 8 197 Miscellaneous Gene Families AT1G80280 42.647 2.29e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00305 - - gmx:100811069 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00305 01 3291025 3293859 Cca05g01595 05 35236079 35240950 PCT