Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00304 ATGGCTTGGTTATGGCGCGCGAGTGCCAAATTCTCTCTCGTTGCCTCCGCCGCGGGCGGTGGCGTCACGGCGGCACTCATTGCCTCCTCCGACGACCCCAAAGCAGCGCTCAAACTCTGCACCACCGTCCCCCATCGCCTCTTCCGCGACGCCGTCACGGCCGCCAACATTGCTTTCGATTATGAATATTCACTGTGGGGACTCGCGGAAGGGAGTAGTGAGAGGGAGAGAATCAAACGTGAAGTTCACCTCCGGTCAGCGCGAAAACTTCAAGAACTTTGTTTTAAGAATGGAGGGATTTATATAAAGCTTGGACAGCATCTTGGACAGTTGGAATATTTAGTTCCTGAGGAATATGTTCGGACAATGAGGGAGTCTATGCTAAATAAATGTCCAGTTTCTTCATATGAACAAATATGCAGCGTCTTCAAGAAAGAGCTTGGAGACACCCCGGATAAAATATTTTCTGAGTTTGATCCAGTCCCTATAGCAAGTGCTTCCCTTGCACAAGTTCATGTAGCTCGCATGCATGACGGCCAAAAAGTTGCTGTGAAGGTTCAGCATACACACATGACTGATACTGCAGCTTCTGATCATGCTACTGTGGAATTGATTGTGAACACATTGCACAGATTTTTCCCCAGTTTTGATTACAGGTGGTTGATTGATGAGATTAGTGAAAGTTTGCCCAAGGAATTGGATTTTTTAACCGAGGCAAAGAACAGTGAGAAGTGTTTGGAGAACTTTCACAAGTTGTCGCCTCATATTGCAAATTATGTATATGCACCAAAAGTGTATTGGAATCTGAGTACCTCAAAGCTGCTAACAATGGAATTCATGGAAGGTGCTTATGTAAATGATGTGAAGACCATTCAGAAGCTTGGGATCAACCCGCATGAACTTTCAATATTGGTTAGCCATGCTTTTGCGGAAATGATGTTCAAACATGGGTTTGTGCATTGTGATCCACATGCTGCTAACTTATTGGTTCGCCCATTGCCTTCCAGCAAAGCTAGCATTTTGGGCAAGAGAAGACCACAGTTGGTCCTTTTAGACCATGGACTCTATAAAGAGCTTGACGTCCAAACAAGAACTAATTATGCTTCACTATGGAAGGCATTGATATTTTCTGATGCTAATGCAATCAAGGAATACAGTACAAAGTTGGGTGCTGGGGAGGATTTATATGCACTTTTTGCTGGAGTTCTAACTATGAGACCGTGGAATAGAGTTGTTGATCCATCTATGGATCATTTAGTTATACAGGGAAATGAGAGTGATCGATTAGAACTGCAGATGTATGCTTCTCAATATTTCCATGAAATCTCAGAGCTTCTTAGGAGATTACCTCGTGTGATTCTTCTAATGATGAAGACAAATGACTGTTTACGGGCGGTCAACAATTCTCTGGTACAGGGATCATCTATGGAGACATTTTTTATCATTGGAAAAGTTTCTTCTGAGGCTGTCATCGAGGCAAAGTTGTTGCAAAGCAGATCACTTTTAACTTGGTTAAACGTTGAATTGAATAAGATTTTGCTGGAAGTACGACTTTGGGGAATGCAAGTTGCCTTGTGGCTTTTACAACTTAGAAAGGCTTTGTCTTGGTCTAACCAAGCATTGTAG 1626 0.4317 MAWLWRASAKFSLVASAAGGGVTAALIASSDDPKAALKLCTTVPHRLFRDAVTAANIAFDYEYSLWGLAEGSSERERIKREVHLRSARKLQELCFKNGGIYIKLGQHLGQLEYLVPEEYVRTMRESMLNKCPVSSYEQICSVFKKELGDTPDKIFSEFDPVPIASASLAQVHVARMHDGQKVAVKVQHTHMTDTAASDHATVELIVNTLHRFFPSFDYRWLIDEISESLPKELDFLTEAKNSEKCLENFHKLSPHIANYVYAPKVYWNLSTSKLLTMEFMEGAYVNDVKTIQKLGINPHELSILVSHAFAEMMFKHGFVHCDPHAANLLVRPLPSSKASILGKRRPQLVLLDHGLYKELDVQTRTNYASLWKALIFSDANAIKEYSTKLGAGEDLYALFAGVLTMRPWNRVVDPSMDHLVIQGNESDRLELQMYASQYFHEISELLRRLPRVILLMMKTNDCLRAVNNSLVQGSSMETFFIIGKVSSEAVIEAKLLQSRSLLTWLNVELNKILLEVRLWGMQVALWLLQLRKALSWSNQAL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00304 541 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
Cca01g00304 541 PANTHER ABC1 FAMILY PROTEIN 8 532 - -
Cca01g00304 541 PANTHER BNAC04G05270D PROTEIN 8 532 - -
Cca01g00304 541 CDD ADCK1-like 126 390 IPR045307 -
Cca01g00304 541 SUPERFAMILY Protein kinase-like (PK-like) 132 331 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00304 Cca-Chr1 3255892 3261928 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00304 K08869 - gmx:100796182 1009.59