Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00302 ATGGTTGCACCTGCAAGGCCTCACTTCGTTCTCTTCGGCTCCTCCATTGTTCAGCTTAGTTTCAGCCACGGCGGTTGGGGTTCTCATCTTTCTGACGTCTACTCTCGCAAGGCAGACATATTGTTGCGAGGATACTATGGATGGAACTCAAGACGCGCCCTCCAAGTCCTCAACCAAGTTTTCCCAAAGGATGCTGCAACACAGCCTTCTCTTGTGATAGTTTATTTTGGCGGTAATGATTCCATGGGTCCTCATTCGTCTGGCCTAGGCCCTCATGTGCCTCTTGATGAATATGTTGAAAACATGAGAAAGATTCTGATTCATATTCAGGGTCTCTCTGAAAGGACACGTATCATTGTTCTCAGTTGTCCTCCTGTCAATGAGGAAATAGTGCGTGGAAACACTAGTACAATTTTTAGTGAGCTGGTAAGAACAAATGAATTGTGCCAAAGCTACTCAGAAGCTTGTATTAAGCTGTGCAAGGAACTGGATATCAAAGTCGTTGATCTTTTTACTGCACTACAGAAGAGAGATGACTGGATGAATGTTTGTTTCACTGATGGTATCCATTTAGCAGCTGAGGGAAGCAAAATTGTGGTGCAGGAGATACTGAGAGTGCTTAAGGAGGCTGATTGGGAGCCATGCCTCCACTGGAAATCCATGCCCACTGAATTTTCAGAAGACTCACCATATGATCTTGTTGCTGCTGATGGGAAAACTACATTGAATCCCTCAGAGTGGACCTTTTACAGAGAGATTCAGTGGGATTAA 771 0.4475 MVAPARPHFVLFGSSIVQLSFSHGGWGSHLSDVYSRKADILLRGYYGWNSRRALQVLNQVFPKDAATQPSLVIVYFGGNDSMGPHSSGLGPHVPLDEYVENMRKILIHIQGLSERTRIIVLSCPPVNEEIVRGNTSTIFSELVRTNELCQSYSEACIKLCKELDIKVVDLFTALQKRDDWMNVCFTDGIHLAAEGSKIVVQEILRVLKEADWEPCLHWKSMPTEFSEDSPYDLVAADGKTTLNPSEWTFYREIQWD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00302 256 Gene3D SGNH hydrolase 6 235 IPR036514 -
Cca01g00302 256 Pfam GDSL-like Lipase/Acylhydrolase family 11 197 IPR013830 -
Cca01g00302 256 PANTHER GDSL ESTERASE/LIPASE CPRD49-LIKE 1 253 - -
Cca01g00302 256 CDD Isoamyl_acetate_hydrolase_like 8 207 - -
Cca01g00302 256 SUPERFAMILY SGNH hydrolase 3 207 - -
Cca01g00302 256 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 253 IPR045136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00302 Cca-Chr1 3225769 3230482 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00302 K23978 - gmx:100499873 501.516