Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00249 ATGGACTCCTCCGCTGCCATTCGATCCTTTCACTATCCCATTGGCACTATGTCCCATATGCGACCCTCCCTTGGGAAGCAAGTATTAGTTCCCATCCATAATGTCAGATCAAACTCTAAAACTAGACTTTTCATCCAGCATTTTTCATATGGTCAGAAGCACATTAACTTCCACACGAAGGGGAAGAACACACTAGTTTCATGCGCAAAAACAGCTGAAGCTATCAACAAATCCAAGTCTGATGTTACTTCAAATAGCACTCCACAAGACTCATTGGAGAAAAAGCCTTTGCAAATAGCTACTTTTCCTAATGGATTTGAGGCTTTGGTATTAGAGGTCTGTGATGAGACTGAAATTGCTGAACTGAAAGTAAAGGTTGGAGATTTTGAAATGCATATTAAGCGAAACATTGGAGCAACAAAAGCTCCTTTGTCTAACATCTCACCAACTACACCACCACCAATTCCTAGTAAACCTATGGATGCAGCGGCACCTGCTACCCTGCCACCATCACCACCAAAATCATCACCACAAAAGACCAACCCATTTTCAAATGCTTCCAAAGAGAAATCACCAAGATTGGCAGCATTGGAGGCCTCTGGTATCAATAACTATGTCTTAGTATCATCTCCCAGGGTTGGCTTATTCCGAAGAGGTAGAACAGTGAAAGGGAAGAGGCAACCTCCTATCTGTAAAGAGGGTGATTTTATCAAAGAAGGACAAGTCGTTGGGTATTTGGATCAGTTTGGCACTGGACTTCCTATTAAGTCTGAAGTGTCTGGAGAAGTGTTGAAGCTACTTGTTGTCGATGGAGAGCCTGTTGGTTATGCAGACCCTCTTATTGCTGTCTTGCCGTCTTTTCATGACATCAAGTGA 876 0.4281 MDSSAAIRSFHYPIGTMSHMRPSLGKQVLVPIHNVRSNSKTRLFIQHFSYGQKHINFHTKGKNTLVSCAKTAEAINKSKSDVTSNSTPQDSLEKKPLQIATFPNGFEALVLEVCDETEIAELKVKVGDFEMHIKRNIGATKAPLSNISPTTPPPIPSKPMDAAAPATLPPSPPKSSPQKTNPFSNASKEKSPRLAALEASGINNYVLVSSPRVGLFRRGRTVKGKRQPPICKEGDFIKEGQVVGYLDQFGTGLPIKSEVSGEVLKLLVVDGEPVGYADPLIAVLPSFHDIK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00249 291 Gene3D - 204 283 - -
Cca01g00249 291 SUPERFAMILY Single hybrid motif 202 282 IPR011053 -
Cca01g00249 291 MobiDBLite consensus disorder prediction 147 177 - -
Cca01g00249 291 CDD biotinyl_domain 208 283 - -
Cca01g00249 291 MobiDBLite consensus disorder prediction 142 190 - -
Cca01g00249 291 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 1 291 - -
Cca01g00249 291 PANTHER BIOTIN/LIPOYL ATTACHMENT DOMAIN PROTEIN 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00249 Cca-Chr1 2576985 2584609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00249 75 285 Acyl Lipid Metabolism Gene Families AT5G15530 28.378 4.13e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00249 - - gmx:100792471 459.914