Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00247 ATGTCAACCTCATCATCTTCCCAAACCCAATCCCTCAAAATTGGCATAGTTGGATTCGGCACTTTTGGCCAATTTCTGGCCAAAACAATGATAAAACAGGGCCACACATTAGCAGCAACTTCCAGATCCGATTACTCCGACCTCTGTCTCCAAATGGGTATCCATTTTTTCAGGGATGTCAGCACTTTCCTTGCCACCGACTTGGATGTCATAGTGTTATGCACATCGATCCTATCACTGTCTGAGGTTGTCAGGTCAATGCCACTCGCTTCCCTGAAGCGCCCAACACTCTTTGTTGATGTTCTTTCAGTCAAAGAGCACCCAAAAGACCTTCTTCTACGAGTGTTGCCAGAGGACTCGGACATTCTCTGCACACACCCAATGTTTGGACCTGTGACTGGGAAGAATGGATGGAGAGATTTGACTTTCATGTATGACAAAGTTAGAATACGAGATGAAGCTACCTGCTCTAGTTTCATTCAAATTTTTGCAAGTGAGGGTTGCAAGATGGTAGAAATGTCCTGTGAGGAACATGACAAAGCTGCTGCGAAGAGCCAATTTATCACACACACAATAGGAAGGTATGTGGCTTTGTACATATCCAACAAGTCATAG 615 0.4455 MSTSSSSQTQSLKIGIVGFGTFGQFLAKTMIKQGHTLAATSRSDYSDLCLQMGIHFFRDVSTFLATDLDVIVLCTSILSLSEVVRSMPLASLKRPTLFVDVLSVKEHPKDLLLRVLPEDSDILCTHPMFGPVTGKNGWRDLTFMYDKVRIRDEATCSSFIQIFASEGCKMVEMSCEEHDKAAAKSQFITHTIGRYVALYISNKS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00247 204 Pfam Prephenate dehydrogenase, nucleotide-binding domain 35 135 IPR046826 -
Cca01g00247 204 PANTHER AROGENATE DEHYDROGENASE-RELATED 2 197 IPR045011 GO:0006571|GO:0033730
Cca01g00247 204 Gene3D - 1 179 - -
Cca01g00247 204 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 173 IPR036291 -
Cca01g00247 204 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 12 204 IPR003099 GO:0004665|GO:0006571|GO:0008977
Cca01g00247 204 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 2 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00247 Cca-Chr1 2564084 2566143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00247 K15227 - gmx:100810896 341.273