Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00243 ATGGGAAATGGACACGGAACTCATTCCGACGCTGATTCCAGCAGTAAGCGGCTGGTGCTGGCACTGTATGACGCCCTAAACTCCGCCGACTCCCACGCCGTCGCTAACATCCTCGCCGCCGACCTCGAGTGGTGGTTCCATGGTCCGCCGCACCACCAGTTTTTGATGCGCATGCTCACCGGCGATTCCAACGACACCTTCCGCTTCCTCCCCCTAAGGATCGCCTCCTTCGGCCCCACCGTCATCGTCGAGGGCTGCGACACCGCACGCGCCATTGCCTGGGTTCACGCGTGGACCGTCGCCGATGGGATAGTTACCCAGGTCAGGGAGTACTTCAACACTGCCCTCACCGTCACGCGCATCCACGACTCCGACGAGATTCTTCCGGCCACCTCCGCCGCCGGCCGCCTCCCCTGCGTCTGGGAGAGCAGCGTCTCGGGTCGGGTCGGCAAATCCGTTCCCGGTTTGGTTCTCGCCATATAA 483 0.6294 MGNGHGTHSDADSSSKRLVLALYDALNSADSHAVANILAADLEWWFHGPPHHQFLMRMLTGDSNDTFRFLPLRIASFGPTVIVEGCDTARAIAWVHAWTVADGIVTQVREYFNTALTVTRIHDSDEILPATSAAGRLPCVWESSVSGRVGKSVPGLVLAI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00243 160 SUPERFAMILY NTF2-like 13 117 IPR032710 -
Cca01g00243 160 Pfam Wound-induced protein WI12 56 160 IPR009798 -
Cca01g00243 160 Gene3D - 5 123 - -
Cca01g00243 160 PANTHER OS07G0691300 PROTEIN 8 160 IPR009798 -
Cca01g00243 160 PANTHER SENESCENCE ASSOCIATED GENE 20 8 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00243 Cca-Chr1 2529990 2530655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00243 - - lja:Lj0g3v0040339.1 226.098