Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00226 ATGCCTATTCCGAATCTGCAGCAACACTTTCACTTTCAATACCAAATTATGTCTTCATACATGTCAAGTGTTGCAACTTTGCTATTGTTGCATGTCATTATTGGCTTGCTTCTAGTTTCAAATTTGGCCTCTGCTTCAGGCCTAAATGCCACAAATGGACACACAAAACATAGGGCTGAGGTGATCTATGCTCACAATGGAGCTGTTGCCACCGATGACCGTAGATGCTCAAGGATTGGGTTGAAAATTCTCCGTGAAGGAGGGCATGCTGTGGATGCTGCAGTGGCTGCTTCCCTTTGTTTAGGGGTTGTGAGTCCTGCCTCAAGTGGCCTTGGAGGTGGTGCCTTTATGCTTATCAGGTTGGCTAATGGGTTTGCTAAGGCCTATGATATGAGAGAAACTGCTCCTTCTCATGCTTCCAAGGATATGTATGCTGGAAATACTACTTTGAAGGCTGATGGTGCCCTCTCTGTAGCAGTTCCAGGAGAACTTGCTGGGCTTCATGAAGTGTGGAAACAACATGGAAAGCTTCCATGGAAAAGACTTGTAAAGCCATCTGAGATTCTAGCACGTAGAGGGTTTAAGATATCACCTTACCTCTACATGCAGATGGAACAAACAGAGTCAAGTATATTGAAAGACAAGGGTCTCAGTAGCATATTTGCACCAAAAGGAAAACTCTTGAAGCCAGGTGACATGTGCTACAATAAGAAACTTGCTGACACTCTCAGAACAATATCCGAGGTTGGTCCACAAGCCTTCTATGGTGGATTGATTGGCCAAAATTTAGTTAAAGATGTTCAGAATGCTGGAGGGATATTGACCATTGAAGACCTCAAAAAGTACACTGTTAAAGAGAAGGATCCCATATATTCAGATGTTCTTGGACTAAAGATCCTTGGCATGCCTCCCCCTTCAGGTGGGCCTCCAATGATACTACTGCTGAACATTCTAGCTCAATATGATCTTCCTTCTGGCCTTTCTGGTGCCCTTGGGGTCCATCGAGAAATTGAAGCTTTGAAACATGTATTTGCTGTGAGAATGAATCTTGGGGATCCTGATTTTGTAAATGTAACGGGGGTTGTTTCTGATATGCTTTCTCCTAGGCTTGCGAAACAGTTGAAAAAAGACATCAATGATAATAAGACTTTTGGCCCCAGTCATTATGGTGGCAGGTGGAATCAGATCCATGATCATGGTACAAGTCATTTAAATGTAATAGATCTTGAGCGAAATGCCATTTCCATGACCAACACCATAAATGCATATTTTGGTGCAAAGATCCTTTCACCAAGTACAGGAATAGTACTGAACAATGAGATGGATGATTTTTCCATTCCTAGAAATGTTTCCAAGGATGTTCCACCACCAGCTCCTGCCAATTTCATCATGCCAGGAAAGAGGCCATTATCATCCATGTCACCCACTATTGTCCTTAAGGATGGGAAGCTAAAGGCTGCAGTAGGTGCGAGTGGTGGTGCTATGATCATTGCTGCAACTTCAGAGGTTCTTTTAAATCACTTCGTTAAAGGAATGGATCCTTTTTCTTCTATAACAGCTACAAGGGTCTATCACCAGCTAATACCTAACGTGGTGAATTATGAGAATTGGACAACTGTGAGTGGTGACCACTTTGAACTTCCTGCTCATATAAGGGAAGCCCTTAGGCGTAAGGGTCATGTTCTAAAAGGCATAGCCACTGGGACTATTTCCCAATTTATTGTTCTAGAAACTCCTCAGTCATCCAGTAAAAATAAAGGGATTGGAAATGGAAAGCTGGTGGCAGTGAGTGATCCAAGAAAGGGTGGTTTTCCTGCAGGCTATTAA 1827 0.4291 MPIPNLQQHFHFQYQIMSSYMSSVATLLLLHVIIGLLLVSNLASASGLNATNGHTKHRAEVIYAHNGAVATDDRRCSRIGLKILREGGHAVDAAVAASLCLGVVSPASSGLGGGAFMLIRLANGFAKAYDMRETAPSHASKDMYAGNTTLKADGALSVAVPGELAGLHEVWKQHGKLPWKRLVKPSEILARRGFKISPYLYMQMEQTESSILKDKGLSSIFAPKGKLLKPGDMCYNKKLADTLRTISEVGPQAFYGGLIGQNLVKDVQNAGGILTIEDLKKYTVKEKDPIYSDVLGLKILGMPPPSGGPPMILLLNILAQYDLPSGLSGALGVHREIEALKHVFAVRMNLGDPDFVNVTGVVSDMLSPRLAKQLKKDINDNKTFGPSHYGGRWNQIHDHGTSHLNVIDLERNAISMTNTINAYFGAKILSPSTGIVLNNEMDDFSIPRNVSKDVPPPAPANFIMPGKRPLSSMSPTIVLKDGKLKAAVGASGGAMIIAATSEVLLNHFVKGMDPFSSITATRVYHQLIPNVVNYENWTTVSGDHFELPAHIREALRRKGHVLKGIATGTISQFIVLETPQSSSKNKGIGNGKLVAVSDPRKGGFPAGY 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00226 608 Pfam Gamma-glutamyltranspeptidase 82 603 - -
Cca01g00226 608 PANTHER GAMMA GLUTAMYL TRANSPEPTIDASE 38 607 IPR000101 GO:0006751|GO:0036374
Cca01g00226 608 Gene3D - 396 608 IPR043137 -
Cca01g00226 608 Gene3D - 289 393 IPR043138 -
Cca01g00226 608 PANTHER GLUTATHIONE HYDROLASE 1-RELATED 38 607 - -
Cca01g00226 608 TIGRFAM g_glut_trans: gamma-glutamyltransferase 69 539 IPR000101 GO:0006751|GO:0036374
Cca01g00226 608 PRINTS Gamma-glutamyltranspeptidase signature 89 114 - -
Cca01g00226 608 PRINTS Gamma-glutamyltranspeptidase signature 157 175 - -
Cca01g00226 608 PRINTS Gamma-glutamyltranspeptidase signature 175 194 - -
Cca01g00226 608 PRINTS Gamma-glutamyltranspeptidase signature 273 289 - -
Cca01g00226 608 PRINTS Gamma-glutamyltranspeptidase signature 302 321 - -
Cca01g00226 608 PRINTS Gamma-glutamyltranspeptidase signature 401 419 - -
Cca01g00226 608 PRINTS Gamma-glutamyltranspeptidase signature 425 443 - -
Cca01g00226 608 PRINTS Gamma-glutamyltranspeptidase signature 465 480 - -
Cca01g00226 608 PRINTS Gamma-glutamyltranspeptidase signature 489 506 - -
Cca01g00226 608 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 59 608 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00226 Cca-Chr1 2340010 2343629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00226 21 608 Miscellaneous Gene Families AT4G39640 64.805 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00226 K18592 - gmx:100797040 982.63