Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00220 ATGCAACACTTCTGGTTTCATGATAGCCTATCTATCAGACAATATAATAACATGTCTTCCATTGGGGCACGTTCAGCTGAAATTTATGTTATGGAGAAGAGGCAGAAGGAGAAGATGAAGAGAATGGAAGAGGAAAGAGTACGAGGAGGTGAAGTGAGTGCTGAAGAGAGAAAGGTGGCAAGTTCTAGTGTGGGAAAGAACAAGGTGCATCCAGGTAGTGAACAAGGAGTCACACACGATAATGTCTTTAGGGCCAAATAG 261 0.4291 MQHFWFHDSLSIRQYNNMSSIGARSAEIYVMEKRQKEKMKRMEEERVRGGEVSAEERKVASSSVGKNKVHPGSEQGVTHDNVFRAK 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00220 86 MobiDBLite consensus disorder prediction 40 55 - -
Cca01g00220 86 PANTHER BNAC01G00560D PROTEIN 18 81 - -
Cca01g00220 86 MobiDBLite consensus disorder prediction 40 86 - -
Cca01g00220 86 PANTHER OS04G0457400 PROTEIN 18 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00220 Cca-Chr1 2289696 2291183 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00220 - K11651 pvu:PHAVU_001G249700g 83.1889