Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00206 ATGTTCATCCACAATTTTAAGGTCGAGAGTCCAAATGTGAAGTACACCGAGACTGAGATTCAGTCCGTGTACAACTACGAAACTACCGAACTGGTTCACGAGAACAGGAATGGCACCTATCAGTGGATTGTTAAACCCAAATCCGTCAAATACGAATTCAAAACTAGCACTCATGTTCCTAAATTGGGGGTAATGCTTGTGGGGTGGGGTGGAAACAACGGCTCAACCCTCACTGGTGGTGTTATTGCTAACCGAGAGGGAATTTCATGGGCAACAAAAGACAAGATTCAACAAGCCAATTACTTTGGCTCCCTCACCCAAGCCTCAGCTATTCGAGTTGGGTCCTTCCAAGGAGAGGAGATCTATGCTCCATTCAAGAGCCTGCTTCCTATGGTTAACCCTGATGACATTGTGTTTGGGGGTTGGGATATTAGTGACATGAACCTGGCTGATGCCATGGCCAGGGCCAAGGTGTTTGACATCGATCTGCAGAAGCAGTTGAGGCCTTACATGGAATCCATGGTTCCACTCCCTGGAATCTATGACCCGGATTTCATTGCTGCCAACCAGGAAGACCGTGCCAACAACGTCATCAAGGGCACAAAGAAAGAACAAGTTCAGCAAATCATTAAAGACATAAAGGAGTTTAAGGAAGCCACCAAGGTGGACAAGGTGGTTGTCCTGTGGACTGCCAACACAGAGAGGTACAGTAATTTGGTTGTGGGGCTTAATGATACCATGGAGAACCTCTTGGCTTCCCTGGATAAAAATGAGGCTGAGATTTCTCCTTCCACTTTGTATGCCATTGCTTGTGTTATGGAAAATGTTCCTTTCATTAATGGAAGCCCTCAGAACACTTTTGTCCCAGGGCTGATTGATCTTGCCATCAAGAGGAACAGTTTGATTGGTGGAGATGACTTCAAGAGTGGTCAGACCAAAATGAAATCTGTGCTGGTTGATTTCCTTGTGGGGGCTGGTATCAAGCCTACATCAATAGTTAGTTATAACCATCTTGGAAACAATGATGGTATGAATCTCTCGGCTCCACAAACATTCCGGTCCAAGGAAATCTCCAAGAGCAACGTTGTTGATGATATGGTCAACAGCAATGCCATTCTCTATGAGCCTGGTGAACATCCAGACCATGTTGTTGTCATTAAGTATGTGCCTTACGTAGGGGACAGCAAGAGAGCCATGGATGAGTACACTTCAGAGATATTCATGGGTGGAAAGAGTACCATCGTTTTGCACAACACATGCGAGGATTCCCTCTTAGCTGCTCCTATTATCTTGGACTTGGTCCTTCTTGCTGAGCTCAGCACTCGAATCCAGTTTAAAGCTGAAAATGAGGGAAAATTTCACACTTTCCACCCAGTTGCTACCATCCTCAGTTATCTCACCAAGGCTCCTCTGGTTCCACCGGGTACACCAGTGGTGAATGCATTGTCAAAGCAGCGAGCAATGCTGGAAAACATTATGAGAGCTTGTGTTGGATTGGCCCCAGAGAATAACATGATTCTCGAGTACAAGTGA 1533 0.4573 MFIHNFKVESPNVKYTETEIQSVYNYETTELVHENRNGTYQWIVKPKSVKYEFKTSTHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIQQANYFGSLTQASAIRVGSFQGEEIYAPFKSLLPMVNPDDIVFGGWDISDMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQEDRANNVIKGTKKEQVQQIIKDIKEFKEATKVDKVVVLWTANTERYSNLVVGLNDTMENLLASLDKNEAEISPSTLYAIACVMENVPFINGSPQNTFVPGLIDLAIKRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKAENEGKFHTFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENIMRACVGLAPENNMILEYK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00206 510 Gene3D - 381 510 - -
Cca01g00206 510 Gene3D - 1 356 - -
Cca01g00206 510 Pfam Myo-inositol-1-phosphate synthase 62 494 IPR002587 GO:0004512|GO:0006021|GO:0008654
Cca01g00206 510 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
Cca01g00206 510 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 510 IPR036291 -
Cca01g00206 510 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
Cca01g00206 510 PIRSF Myoinositol-ppht_synth 50 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Cca01g00206 510 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Cca01g00206 510 PANTHER INOSITOL-3-PHOSPHATE SYNTHASE 1 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00206 Cca-Chr1 2104400 2108237 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00206 K01858 - gmx:100800820 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02155 09 46688834 46693233 Cca01g00206 01 2104400 2108237 PCT