Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00203 ATGGCAACCCAACCAAAACTCCTCCCTCTCCTTCTCTTCCTTCTCTCACTATGCTTCGCCGGAGCTGTCAGATCGGAGGAAGATTGTGTGTACACGGTGTACGTTCGGACAGGATCAATCATAAAGGGAGGAACCGATTCCGTTATTGGGCTGAAGCTATACAGCGGGAACGGGTACTACATATACATCACGGACCTGGAGGCATGGGGCGGGTTAATGGATCCGGGCCACAACTACTACGAGCGCGGCAACCTCGACATATTCAGCGGCAGAGGGCCTTGTTTGGAAGGGCCCGTTTGCGCGGTCAACTTAACTTCTGATGGGTCGGGCCCACATCACGGCTGGTACGTTAACTACGTGGAGGTCACCACCACCGGGGTTCACAAATCCTGCTCTCAGCAGCAGTTCACGGTGGAGCAGTGGCTAGCCACCGACACCTCGCCCTATGAGCTATGGGCTGTCAGGAACTACTGTGACTACAGTTTGGGCCAGGCCCGTTCTCAAATCAACATCGCCCATGCGGCCACGTCTCGGGCTGGGCCCATGTCTGGTTTCTCTATTATGGCCCGCCAGTAG 576 0.559 MATQPKLLPLLLFLLSLCFAGAVRSEEDCVYTVYVRTGSIIKGGTDSVIGLKLYSGNGYYIYITDLEAWGGLMDPGHNYYERGNLDIFSGRGPCLEGPVCAVNLTSDGSGPHHGWYVNYVEVTTTGVHKSCSQQQFTVEQWLATDTSPYELWAVRNYCDYSLGQARSQINIAHAATSRAGPMSGFSIMARQ 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00203 191 PANTHER - 1 188 - -
Cca01g00203 191 CDD PLAT_plant_stress 29 156 - -
Cca01g00203 191 ProSiteProfiles PLAT domain profile. 29 156 IPR001024 GO:0005515
Cca01g00203 191 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 30 147 IPR036392 GO:0005515
Cca01g00203 191 Gene3D PLAT/LH2 domain 20 148 - -
Cca01g00203 191 Pfam PLAT/LH2 domain 31 149 IPR001024 GO:0005515
Cca01g00203 191 PANTHER PLAT-PLANT-STRESS PROTEIN 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00203 Cca-Chr1 2021428 2022518 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00203 - - gmx:100793024 286.574