Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00201 ATGGATTCGGGAAACAGTGGGAGCATGCAATCCTCCAGCACCGGCGGTGACGAAGAGTACGATTCACGCGCCGACACCTCAACAATCTCCGCCTTCCTCAACAACAATAATGTTCCACCGCCGCAACCAACCACAACGTTTGCACCCTTCACCCACCACGTCTTGGACCCTTTGTCTTCCAATTACTCCGATCCCACGCAAAGATCGCACATGCTGTGGTCCAACGTTTCCAGATCCCAACCCCATCCCCCCCACAACAACCAACCTTTTCTGTTAACTCAATTCGGAGGTCAAACTCAACCACGAGGAACCCTCAACAACgttggtgttggtgttggtgttgatggtgatggtgatggtgCTCATGCTTTTCACACCACCACCAGTACTCTCCCTCCAGAAAGTGATGAACAAAACAGTACCAACACCAACACAAACAGTAACATGGTTCGAAACCCGAAGAAGAGGTCAAGAGCTTCTAGGCGTGCACCTACCACTGTTCTTACTACGGACACCACAAATTTCCGAGCCATGGTTCAGGAATTCACTGGCATACCAGCACCACCTTTCACTTCCTCACCTTTCCCGAGAACCAGGTTAGATCTCTTTGCCTCTTCTTCTTCAACCATAAGATCCACTTCCACTCATAATTTAGATCCTTCAACGCCTCCTTATCTTCTTCGGCCCTTTGCGCACAAAGTTCAATCTCAACCCTCTTCAATCCCACCCATGTTAGACACCTTAGCTTCTAACATTTCAAACAATAATACCTACCACCCTTTGAACATGCACAACCCAATTCTGAGCCTGCTACAGCCACCCCCAAAGTACCCTCAACAACCCTCCTTGGAAATACCGCAAAGTGGTGTTGGGTTTGAAGAATTAGGATTGAGCCATGCGCACGTTGGTAATGCTGCTCAGCATCATGATCATCACAACATCCATAACAACATGCGTGCTCCTTCTTCTGaggcctgggcccaggcccaggcccaggcccaAAGAATCGGAAACAATGATGGAGGAGTTTTGAGGTCTCTTGGTGGCGGTGGCACTCTAAACGGAAAGGTTAACTACTCATCGGATTTTCATGGAGAAAAGGGACCCGATTGTGCTGTGGCTGCGAGAAGCGAAGCCATATACGAAAGAATCCTTGGAGAGAGAATGTACAATGTGCAGCATAGGTTGAAGAACACAGACAAAACTATTCTAGGAGTAATTGGTGGCAAGATTTGGGGGATTGTGAGTCGCCGCAATCTCGTTTCATCAAAATCAAAGATATCTTCATGTGTTTTTCAAACATTTCTATATTATATAAACATGTACTATCTGGGGGCACCTTTAAGAGTTATAGAAATTATTATTATAAGGTAA 1374 0.4367 MDSGNSGSMQSSSTGGDEEYDSRADTSTISAFLNNNNVPPPQPTTTFAPFTHHVLDPLSSNYSDPTQRSHMLWSNVSRSQPHPPHNNQPFLLTQFGGQTQPRGTLNNVGVGVGVDGDGDGAHAFHTTTSTLPPESDEQNSTNTNTNSNMVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRTRLDLFASSSSTIRSTSTHNLDPSTPPYLLRPFAHKVQSQPSSIPPMLDTLASNISNNNTYHPLNMHNPILSLLQPPPKYPQQPSLEIPQSGVGFEELGLSHAHVGNAAQHHDHHNIHNNMRAPSSEAWAQAQAQAQRIGNNDGGVLRSLGGGGTLNGKVNYSSDFHGEKGPDCAVAARSEAIYERILGERMYNVQHRLKNTDKTILGVIGGKIWGIVSRRNLVSSKSKISSCVFQTFLYYINMYYLGAPLRVIEIIIIR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00201 457 MobiDBLite consensus disorder prediction 1 24 - -
Cca01g00201 457 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 377 IPR039609 -
Cca01g00201 457 Pfam VQ motif 162 189 IPR008889 -
Cca01g00201 457 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 377 - -
Cca01g00201 457 MobiDBLite consensus disorder prediction 124 165 - -
Cca01g00201 457 MobiDBLite consensus disorder prediction 1 17 - -
Cca01g00201 457 MobiDBLite consensus disorder prediction 124 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00201 Cca-Chr1 1991569 1993629 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00201 - - vun:114182982 329.331