Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00200 ATGGCTCCACTCTTGTACAACCTCGGTCGCAGAAAGATGCTCCTCCTCTCTCTCCTCTTGTTCCTTTCTGTTTCTGTTTGTTCCAGTGTCTGCTCCGAACAACCTCAACCGCAATCTAGTATTAGCCGAAGAAGAACGTTGGAGTTGGAGGCAGAAAAAGAAGAAGAGTACCAACAACCCCTCAAAAAGAAATCCACCAAAAACCAAACCAAGCCCATCAACCTTTCATCCAAAACCGTCAAATCCAATAACCTTAATTCCTCCAAAAACCAAACCAAGCTGTCCAAAACCAGCGACGTTGTCATCCACAAACTCAACTCGACAACGTTGAAAACAAAAACCAAGAAGTCAAACTCCAGCGCCACCAAAACGGCGTCGTTGGATCCCGCGAAAACAAGCGGTGGCGGCAAGAACAAAACGACAAAAGGCACCGGAACGAAGGAACAAGGAAGCGAATCCAGGAAGAAACAATTAGTGCAAGGTTTGGAAGACGAGGAGGTGGAGGGGGATTTGGTTTCGGAGTTGAAAGATCTACCCGTGAAGTTCCAACAATCACTGATCCCTGACCTGGAACGAATCTCCACGACCTCCAAAGCGTACATAGCAAAAGCCAACAAAGAGATGACGAAAGGGTTCAAACCCTACGTGGGGAACAAGTACGCAGCCACCGTGGCCACGTTGCTATCGTGCGCCTTCGCTCTCGTCCCTCTCCTCCTCGTCTCGCTCCTCTTCAACAAAATCAAAGCCTACTTCTCTCTCCAGAAGCTCTTGATCTTCATCCAAGCCTACCTCGCTATCTACTTCCTAATTCTCTCTCTTTCCAATTTCGTCACGGGGCTTGAGCCTCTCAGGTTTTTCTACTCTACTTCGCGCTCCACCTATCTCTGCCTGCAGCTCCTTCAAACTCTCGCTTATGTTCTCTACCTCCTGCTCCTCCTCATGTACCTCGTTTTGGTCTTCTCCACGGACTCTGCCCTCGCCTCCAAGTTCCTGGGCCTGGCCCAAACCTTCGTGGGCTTTTCCGTCGGCTTGCATTACTACATGACGGTGTTTCACCGCGTCGTCTTGAAGCAACCTCCCAAGACCAATTGGAAGATTCACGCCATTTACGCCACGTGCTTTTTCCTCATTTCTTTTCTTGCTGGGGCCGATAGAAGGAAGAAGACCTACTTGGAAGAAGGTGGAGAAGAGGGCAAGAAAAATTGA 1206 0.4917 MAPLLYNLGRRKMLLLSLLLFLSVSVCSSVCSEQPQPQSSISRRRTLELEAEKEEEYQQPLKKKSTKNQTKPINLSSKTVKSNNLNSSKNQTKLSKTSDVVIHKLNSTTLKTKTKKSNSSATKTASLDPAKTSGGGKNKTTKGTGTKEQGSESRKKQLVQGLEDEEVEGDLVSELKDLPVKFQQSLIPDLERISTTSKAYIAKANKEMTKGFKPYVGNKYAATVATLLSCAFALVPLLLVSLLFNKIKAYFSLQKLLIFIQAYLAIYFLILSLSNFVTGLEPLRFFYSTSRSTYLCLQLLQTLAYVLYLLLLLMYLVLVFSTDSALASKFLGLAQTFVGFSVGLHYYMTVFHRVVLKQPPKTNWKIHAIYATCFFLISFLAGADRRKKTYLEEGGEEGKKN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00200 401 PANTHER CELL WALL INTEGRITY/STRESS RESPONSE COMPONENT-LIKE PROTEIN 9 401 - -
Cca01g00200 401 MobiDBLite consensus disorder prediction 50 161 - -
Cca01g00200 401 MobiDBLite consensus disorder prediction 63 147 - -
Cca01g00200 401 PANTHER PROTEIN, PUTATIVE-RELATED 9 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00200 Cca-Chr1 1973214 1974998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00200 - - ccaj:109796106 639.802