Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00198 ATGGATAAGTCCCGTAAAGTTCCTTCCTTCAGCTGTGAATTGAGAATTATACAAGCCCAAAACGTTGATTCCATCAAATCCACCAAAAACCTATTTGCTAGGTTATATCTTCCCTCAGGAAACAACAAAAGAATTCAACTCAACACCAAGAAAGTTTCCTCCAACACCAAACATGTTCCCTTTTGGAACGAGTCCTTCAGCCTAGAGTGTTCATGCCCCCAAGAATTCTTGGAAAGCCTCAAGAAGGAAAGCCTAGTGTTGGAGCTAAGGCAAAGCAAGATGTGGGGGTCATCACATGTGGTGGGGAGGGGTGAGATTCCATGGAAGGCAATTCTTGAATCACCAAACATGGAGTTCAAAGAGTGGGTGAAGATGATAGATTTGGTGAGTGGAATTAGTACTAGTGATTGTTGTGAAGATGATGCTACTTTAAGGGCACCACAAGTGCAAGTGGAGATAAAAATAAGAGTGGAGAAAGACAATAATAGGAGAAGGAGGTTGATCAAGGATAATTGGGATAAGTGTGGGTGCAAACATGGACATGATCAACATGCATGGTGCAGTGTCGATGATTATGATATATTTGCTTTGGGGGCAGTTTTGGAAGCTTTTTGA 615 0.4195 MDKSRKVPSFSCELRIIQAQNVDSIKSTKNLFARLYLPSGNNKRIQLNTKKVSSNTKHVPFWNESFSLECSCPQEFLESLKKESLVLELRQSKMWGSSHVVGRGEIPWKAILESPNMEFKEWVKMIDLVSGISTSDCCEDDATLRAPQVQVEIKIRVEKDNNRRRRLIKDNWDKCGCKHGHDQHAWCSVDDYDIFALGAVLEAF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00198 204 Gene3D C2 domain 1 135 IPR035892 -
Cca01g00198 204 ProSiteProfiles C2 domain profile. 1 123 IPR000008 -
Cca01g00198 204 PANTHER OSJNBA0006M15.15 PROTEIN 1 204 - -
Cca01g00198 204 SMART C2_3c 11 120 IPR000008 -
Cca01g00198 204 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 129 IPR035892 -
Cca01g00198 204 CDD C2 13 124 - -
Cca01g00198 204 PANTHER OSJNBA0006M15.15 PROTEIN 1 204 - -
Cca01g00198 204 Pfam C2 domain 13 117 IPR000008 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00198 - - ccaj:109803320 414.461