Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00197 ATGCAGAGAGGCACGCCCGTTAGAAAGCCAAACGCCTCCACCTCCGACCTCCTCACTTGGTCGGAAACTCCTCCGCCGGACTCCGCCTCCGCCACTCGCTCCGGCCAGCCTTCAGATAGAATCAGCAAGGTTCTCCATGGCGGCCAGCTCACCGACGAAGAAGCGCAGACGCTATCCAAGAGCAAACCGTGCTCAGGGTATAAAATGAAAGAGATGACTGGAAGTGGTATATTTTCTGCCAATGGGGAAGATTCTGCATCAGAAGCGAATGCTGCTAATTCCAGTAGCAGAACAAGCATACGCATATGTCAGCAAGCAATGAATGGAATTAGTCAGATATCCTTCAGCACTGATGAAAGTATTTCTCCTAAAAAACCTACCTCGATACCTGAGGTGGCGAAGCAGCGTGAACTGAGTGGGACAATGCAAAGTGATTCGGACTCAAAGAGTAAGAAGCAAATATCAAATGCCAAGACCAAGGAGCTCAGTGGAAATGACATATTTGGCCCTCCTCCTGAAATTGTGCCTCGTTCAGTGGCAGCTGCACGCACTTTGGAATCAAAGGAAAGTAAAGACATGGGAGAGCCTCTCCCCAGAAATGTCCGAACATCAGTGAAAGTTTCCAATCCTGCAGGTGGCCAAAGTAATATCTTATTTGGTGAAGCACCCGTTGAGAAGACATCAAAGAAGATACATAACCAGAAGTTTGCGGAGCTGACGGGCAATAATATTTTCCAAGGAGATGTTCCTCCAGGCTCAGCAGAAAAGCCTCTGAGCAGGGCTAAGCTGAGAGAAATGACTGGCAGTGACATATTTGCTGACGGCAAGGCCGAAATCAAAGACCCTGTGCGAGGTGCACGGAAACCCCCTGGTGGAGAGAGCAGCATTGCCTTGGTTTAA 900 0.4922 MQRGTPVRKPNASTSDLLTWSETPPPDSASATRSGQPSDRISKVLHGGQLTDEEAQTLSKSKPCSGYKMKEMTGSGIFSANGEDSASEANAANSSSRTSIRICQQAMNGISQISFSTDESISPKKPTSIPEVAKQRELSGTMQSDSDSKSKKQISNAKTKELSGNDIFGPPPEIVPRSVAAARTLESKESKDMGEPLPRNVRTSVKVSNPAGGQSNILFGEAPVEKTSKKIHNQKFAELTGNNIFQGDVPPGSAEKPLSRAKLREMTGSDIFADGKAEIKDPVRGARKPPGGESSIALV 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00197 299 MobiDBLite consensus disorder prediction 114 221 - -
Cca01g00197 299 PANTHER N-LYSINE METHYLTRANSFERASE 1 299 - -
Cca01g00197 299 Pfam Protein of unknown function (DUF4057) 3 297 IPR025131 -
Cca01g00197 299 PANTHER HEMATOLOGICAL/NEUROLOGICAL-LIKE PROTEIN 1 299 - -
Cca01g00197 299 MobiDBLite consensus disorder prediction 78 98 - -
Cca01g00197 299 MobiDBLite consensus disorder prediction 1 39 - -
Cca01g00197 299 MobiDBLite consensus disorder prediction 1 98 - -
Cca01g00197 299 MobiDBLite consensus disorder prediction 275 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00197 Cca-Chr1 1938002 1941143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00197 - - gmx:100804656 526.554