Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00179 ATGCAACAACAACTTTACGTGGAACAATATGAAAAGAAATTGAATCTGATGGCAGAGCAAGTGAGAAAAGCTGATGAAGAGAGAAGTCGAGCCTTCAATGAGCTGACACAAATGAGAAAGGTTGCTAAGGAGACTAATGTCAGGGTTGATGAAGCGTTATCCATTAAGAGAACAATTTCAGATCCACATGTAATAAAACAACACATGGGTATTAAAGACAACAACATTGAACCATCAAAACAACGATTGTCAGCAAAAGATGCTTTGTTGGACAACATGAGGAACGAGATGGATTATCTTAGATCATCTGAAGCTAATGTAATGGCCATATTGTCTGATTATAGAAGGAAAATTCAAAAGTTGGAGGCTGAACTAGACAAGCGAAAAGAATCAGAAGCAAATTTGTTTGACACATTGGTAATGCAAACAAAACAGTTAGAGCAAAATAAGATTTTGCTTGAAGAATCAAAGCTTGAAATCACTTCTCTAGAAGAAAAACTAAAGCCTCTTCAAGTGAGTGCCACCCAAACCATCAAAACTCCTGTGATGGACCATAGCTTTTCTAGAAAAAAAAGTGTAAAGGGCTTGGAAATTGAAGCCGAGCTAGAAGATGAGTTGTTCAATGATGAAGGACGACCCAAGAAGGCCAAAACCACGCTTGAAGAGATAAATATACTTAAAAATGAATTGAAGTTAGCAATGGAAGCAGAGGAAAATAGCAAGAAGGCCATGGATGATTTGGCATTTGCACTCAAAGAAGTGGCAACAGAAGCCAACCAGGTAAAGGCAAAACTAACCCTGAGCCAAGTGGAACTAGAACACACCAAAGGGGATGCAGAGCGTTGGAGGACAATGTTAGGAAGCACAGAAGAAAAGTACAAGGTACTTCTAGAAGCAACTAGGAAAGAAGCTGATAGATACAAAAATACAGCTGAGAGATTGAGATTAGAGGCTGAAGAGTCCCTTTTGGCATGGAATGGGAAGGAAACTGAGCTTGTAAATTGCATTAGAAGAGCTGAAGAGGAAAGGTTACGTTCACAAAAAGAAACCACTAGAGTTATTGAGATGCTAAATGAAGCGGAAAACAAGATAAGAGTTTCCAAGGATGAAAATCAAAAGTTACGTGATATACTAAAACAAGCCTTGAATGAAGCTAATGTCGCAAAAGAGGCTGCGGAAATTGCAAAGGCTGAAAATGCTCGACTACAAGATGGTCTTAACCTACTTGTCCACGAGAATGAGATGCTGAAAATCCATGAAGCTGCGTCATTTGAGAATATTAGAGAGTTGAAACGTATGCTATCAGAATCATCCATGAAGGAGTTCAAACACGAAGATGTTGAGAAGCCAAAAGAAGGTGGCAAGGAGGATAAGGAATCAGGGAGAAAAGCAAAGGCACATCATCCCTCAATGGATCATAGGGAGCATAAAGAATCTAAGAGTTTGAACAAAACTTTTAGTCTTAATTTGAAGGATATGATAACACCCCACAAGCAACAACACAACAACAAGGTGGGGAACGAAGAGACCAACAAGGATACAGATGATGACACATTAAGAGGTTCAATATTTGATGAAGTGGATTCATCGGATTCAGAATTACGTCACGATGGAGAAATGGGAATCCCTGATGATTTTGACCATCTAGATGAATCACATTTTGATGATCCCGAGGGTGACAGAAACTCAAGGAAACGAAGAGCTTTGCTAAGAAGATTTGGGGACCTTATTCGAAGAAAAGGTTACCATAATCACCGAAAGGAACCATCCAATGAGGAACATTTACAAACGTGA 1794 0.3919 MQQQLYVEQYEKKLNLMAEQVRKADEERSRAFNELTQMRKVAKETNVRVDEALSIKRTISDPHVIKQHMGIKDNNIEPSKQRLSAKDALLDNMRNEMDYLRSSEANVMAILSDYRRKIQKLEAELDKRKESEANLFDTLVMQTKQLEQNKILLEESKLEITSLEEKLKPLQVSATQTIKTPVMDHSFSRKKSVKGLEIEAELEDELFNDEGRPKKAKTTLEEINILKNELKLAMEAEENSKKAMDDLAFALKEVATEANQVKAKLTLSQVELEHTKGDAERWRTMLGSTEEKYKVLLEATRKEADRYKNTAERLRLEAEESLLAWNGKETELVNCIRRAEEERLRSQKETTRVIEMLNEAENKIRVSKDENQKLRDILKQALNEANVAKEAAEIAKAENARLQDGLNLLVHENEMLKIHEAASFENIRELKRMLSESSMKEFKHEDVEKPKEGGKEDKESGRKAKAHHPSMDHREHKESKSLNKTFSLNLKDMITPHKQQHNNKVGNEETNKDTDDDTLRGSIFDEVDSSDSELRHDGEMGIPDDFDHLDESHFDDPEGDRNSRKRRALLRRFGDLIRRKGYHNHRKEPSNEEHLQT 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00179 597 MobiDBLite consensus disorder prediction 574 597 - -
Cca01g00179 597 MobiDBLite consensus disorder prediction 437 482 - -
Cca01g00179 597 Coils Coil 7 27 - -
Cca01g00179 597 MobiDBLite consensus disorder prediction 497 597 - -
Cca01g00179 597 Coils Coil 146 166 - -
Cca01g00179 597 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 12 584 - -
Cca01g00179 597 Coils Coil 357 398 - -
Cca01g00179 597 MobiDBLite consensus disorder prediction 502 565 - -
Cca01g00179 597 Coils Coil 297 324 - -
Cca01g00179 597 Coils Coil 104 131 - -
Cca01g00179 597 Coils Coil 216 253 - -
Cca01g00179 597 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 12 584 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00179 - - gmx:102667736 797.734