Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00170 ATGGCTTACATAGCCACAGTTGGTGTTAACAGCATGAGCAGTGGAGTCACCACTGTGGATTGCCAGAAACAAGTGAGATCATGGAGGCTCCTACGTTCCCTCATGGAACTTCTCATCCCCACTTGCAACTGCACCTTCGTCGAAGAACAACAAGAACAAGACCAGTACCAAAAAAGGTGTCTCCAAAAGCACCATAATCCACAACAACTCATGATGTCTTCAACTTCAACCACAGTCACTGGCACCATCTTCGGATACCGTAGAGGAAAGGTAAGTTTTTGCATCCAGGCTAATGCTAACTCTAGCAACCCTATTCTTCTGCTAGAGTTTTCAGTTCCCACAAGCGTTTTGGCTAAGGAAATGAGAGGTGGGGCACTGAGAATTGTGCTAGAGAGTGGCACCACAGGAGCATGcaacaacaacaacaacaacaacaacCTTTTTTCCACGCCTTTGTGGAGCATGTACTGCAATGGGAGGAAAGTGGGGTATGCAGTGAAACGTAGGCCTTCAAGTGGTGACTTTGAAGCACTGAGTTTGATGCGTTGTGTTGCTGTGGGGACTGGTGTTATGAACAGTTGCAAGGAGGATGAGCTTATGTACCTTAGAGCAAACTTTCAAAGGGTTCGTGGCTCATCCAATTGTGAGTCTTTCCATTTGATTGATCCAGAAGGAAGCATTGGTCAAGAGCTTAGTATTTTCTTTTTCAGGCCTAGGTGA 720 0.4458 MAYIATVGVNSMSSGVTTVDCQKQVRSWRLLRSLMELLIPTCNCTFVEEQQEQDQYQKRCLQKHHNPQQLMMSSTSTTVTGTIFGYRRGKVSFCIQANANSSNPILLLEFSVPTSVLAKEMRGGALRIVLESGTTGACNNNNNNNNLFSTPLWSMYCNGRKVGYAVKRRPSSGDFEALSLMRCVAVGTGVMNSCKEDELMYLRANFQRVRGSSNCESFHLIDPEGSIGQELSIFFFRPR 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00170 239 PANTHER DUF617 FAMILY PROTEIN 12 237 - -
Cca01g00170 239 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 79 237 IPR006460 GO:0010274
Cca01g00170 239 PANTHER - 12 237 - -
Cca01g00170 239 Pfam Protein of unknown function, DUF617 79 237 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00170 Cca-Chr1 1648104 1649072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00170 - - ccaj:109792906 468.388